RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 GPR89BP0CG08 455 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 PPP1R2P41236 205 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 CA7P43166 264 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 CDC16Q13042 620 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 ARMC12Q5T9G4 340 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 PLEKHA7Q6IQ23 1121 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 PPP1R32Q7Z5V6 425 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 TGIF2LYQ8IUE0 185 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 ZNF547Q8IVP9 402 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 BCORP1Q8N888 145 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 DNAJB14Q8TBM8 379 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 EPS8L1Q8TE68 723 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 SMARCE1Q969G3 411 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 LYSMD1Q96S90 227 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 DPH2Q9BQC3 489 aaPredicted RBP13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 ENKD1Q9H0I2 346 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 OSGEPL1Q9H4B0 414 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 GSX1Q9H4S2 264 aaPredicted RBP13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 WDR37Q9Y2I8 494 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 BICDL2A1A5D9 508 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 GOLGA6L4A6NEF3 574 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 TMEM200CA6NKL6 621 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 SMC2O95347 1197 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 ZBTB11O95625 1053 aaPredicted RBP13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 GPD1P21695 349 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 RPL10P27635 214 aaKnown RBP13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 PBX1P40424 430 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 STX17P56962 302 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 PLCL1Q15111 1095 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 SEPT7Q16181 437 aaKnown RBP13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 PTCHD3Q3KNS1 767 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 ZNF648Q5T619 568 aaPredicted RBP13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 KLHL10Q6JEL2 608 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 MTFR2Q6P444 385 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 C11orf96Q7Z7L8 435 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 ADGRG6Q86SQ4 1221 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 TMEM151BQ8IW70 566 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 CARFQ8N187 725 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 GPR150Q8NGU9 434 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 OR1L3Q8NH93 324 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 TAAR6Q96RI8 345 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 MDFIQ99750 246 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 TIMM29Q9BSF4 260 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 NAA15Q9BXJ9 866 aaKnown RBP13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 OR2AG1Q9H205 316 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 DTLQ9NZJ0 730 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 NOCTQ9UK39 431 aaKnown RBP13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 MAN1B1Q9UKM7 699 aa13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 RPH3AQ9Y2J0 694 aaPredicted RBP13.33□□□□□ -0.28
VCPKMT-201ENST00000395859 ATRQ13535 2644 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 OR5K3A6NET4 321 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 PDZK1P1A8MUH7 402 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 DFFAO00273 331 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 CCL21O00585 134 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 CNOT3O75175 753 aaKnown RBP13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 CLDN7O95471 211 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 PRLP01236 227 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 KRT3P12035 628 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 ZNF7P17097 686 aaPredicted RBP13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 ERCC2P18074 760 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 IL4RP24394 825 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 ARCN1P48444 511 aaKnown RBP13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 SPINT3P49223 89 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 ZNF143P52747 638 aaPredicted RBP13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 MAXP61244 160 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 Q0VFX4 171 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 GSE1Q14687 1217 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 TLR1Q15399 786 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 ASIC2Q16515 512 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 CA9Q16790 459 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 DNTTIP2Q5QJE6 756 aaKnown RBP13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 ISM2Q6H9L7 571 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 FAM180AQ6UWF9 173 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 NR4A3Q92570 626 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 MTFMTQ96DP5 389 aaKnown RBP13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 PPM1MQ96MI6 270 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 C11orf70Q9BRQ4 267 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 ACTR5Q9H9F9 607 aaPredicted RBP13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 TRIM39Q9HCM9 518 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 ARFGAP3Q9NP61 516 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 ATP13A2Q9NQ11 1180 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 CTNND2Q9UQB3 1225 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 PADI2Q9Y2J8 665 aa13.32□□□□□ -0.28
VCPKMT-201ENST00000395859 AKAP6Q13023 2319 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 TRGV8A0A0C4DH27 118 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 BHMG1C9JSJ3 638 aaPredicted RBP13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 VEGFDO43915 354 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 UMODP07911 640 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 CHRNB2P17787 502 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 ARL4DP49703 201 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 DRG2P55039 364 aaKnown RBP13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 AIMP2Q13155 320 aaKnown RBP13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 SCYL2Q6P3W7 929 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 SLC30A5Q8TAD4 765 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 CXorf40BQ96DE9 158 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 CLIP3Q96DZ5 547 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 GBP5Q96PP8 586 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 FAM83DQ9H4H8 585 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 GPATCH2LQ9NWQ4 482 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms