RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 VSTM4Q8IW00 320 aa18.88■□□□□ 0.61
COL11A2-204ENST00000395194 RASGEF1AQ8N9B8 481 aa18.88■□□□□ 0.61
COL11A2-204ENST00000395194 OXNAD1Q96HP4 312 aaPredicted RBP18.88■□□□□ 0.61
COL11A2-204ENST00000395194 MRGPRX2Q96LB1 330 aa18.88■□□□□ 0.61
COL11A2-204ENST00000395194 SRPK1Q96SB4 655 aaKnown RBP18.88■□□□□ 0.61
COL11A2-204ENST00000395194 WASH6PQ9NQA3 447 aa18.88■□□□□ 0.61
COL11A2-204ENST00000395194 FAM8A1Q9UBU6 413 aa18.88■□□□□ 0.61
COL11A2-204ENST00000395194 ANAPC2Q9UJX6 822 aa18.88■□□□□ 0.61
COL11A2-204ENST00000395194 TP53TG5Q9Y2B4 290 aa18.88■□□□□ 0.61
COL11A2-204ENST00000395194 PCDHB3Q9Y5E6 796 aa18.88■□□□□ 0.61
COL11A2-204ENST00000395194 CFAP20Q9Y6A4 193 aaKnown RBP18.88■□□□□ 0.61
COL11A2-204ENST00000395194 LOC285095A0A1B0GVY8 99 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 CDC14CA4D256 554 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 TOX3O15405 576 aaPredicted RBP18.87■□□□□ 0.61
COL11A2-204ENST00000395194 CASRP41180 1078 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 TNNT3P45378 269 aaPredicted RBP18.87■□□□□ 0.61
COL11A2-204ENST00000395194 SEPT6Q14141 434 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 TFDP2Q14188 446 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 NFE2L1Q14494 772 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 PTPRCAPQ14761 206 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 PLCL1Q15111 1095 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 TMEM220Q6QAJ8 160 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 CERS6Q6ZMG9 384 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 DET1Q7L5Y6 550 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 AMZ2Q86W34 360 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 ZNF567Q8N184 647 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 ZDHHC12Q96GR4 267 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 IL17CQ9P0M4 197 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 MED13Q9UHV7 2174 aa18.87■□□□□ 0.61
COL11A2-204ENST00000395194 IGHV5-51A0A0C4DH38 117 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 GLYATL1P3A0A0U1RQE8 302 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 K7EM74 188 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 POP7O75817 140 aaKnown RBP18.86■□□□□ 0.61
COL11A2-204ENST00000395194 SLC1A1P43005 524 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 MARCKSL1P49006 195 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 NR2C2P49116 596 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 IL11RAQ14626 422 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 RPE65Q16518 533 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 GPRC6AQ5T6X5 926 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 DUS1LQ6P1R4 473 aaKnown RBP18.86■□□□□ 0.61
COL11A2-204ENST00000395194 BZW1Q7L1Q6 419 aaKnown RBP18.86■□□□□ 0.61
COL11A2-204ENST00000395194 PID1Q7Z2X4 250 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 PPP1R3BQ86XI6 285 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 CCDC50Q8IVM0 306 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 RBM12BQ8IXT5 1001 aaKnown RBP18.86■□□□□ 0.61
COL11A2-204ENST00000395194 BEND7Q8N7W2 519 aaPredicted RBP18.86■□□□□ 0.61
COL11A2-204ENST00000395194 SIDT2Q8NBJ9 832 aaKnown RBP18.86■□□□□ 0.61
COL11A2-204ENST00000395194 BRSK1Q8TDC3 778 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 KLHL6Q8WZ60 621 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 RUFY1Q96T51 708 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 ANP32EQ9BTT0 268 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 TRABDQ9H4I3 376 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 C10orf88Q9H8K7 445 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 IMP3Q9NV31 184 aaKnown RBP18.86■□□□□ 0.61
COL11A2-204ENST00000395194 KCTD3Q9Y597 815 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 KCNMB2Q9Y691 235 aa18.86■□□□□ 0.61
COL11A2-204ENST00000395194 EBLN1P0CF75 366 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 FGF5P12034 268 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 FOLR1P15328 257 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 NELFEP18615 380 aaKnown RBP18.85■□□□□ 0.61
COL11A2-204ENST00000395194 FECHP22830 423 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 TUBB3Q13509 450 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 DNASE1L3Q13609 305 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 SLC1A5Q15758 541 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 CRTC2Q53ET0 693 aaPredicted RBP18.85■□□□□ 0.61
COL11A2-204ENST00000395194 CT55Q8WUE5 264 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 P3H4Q92791 437 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 MAP3K3Q99759 626 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 ZCCHC2Q9C0B9 1178 aaKnown RBP18.85■□□□□ 0.61
COL11A2-204ENST00000395194 TWSG1Q9GZX9 223 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 EPHA6Q9UF33 1036 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 POLHQ9Y253 713 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 PKP3Q9Y446 797 aa18.85■□□□□ 0.61
COL11A2-204ENST00000395194 hCG_1818297A0A087WSY0 165 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 PIPSLA2A3N6 862 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 GAPDHSO14556 408 aaPredicted RBP18.84■□□□□ 0.61
COL11A2-204ENST00000395194 PSTPIP1O43586 416 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 NTRK1P04629 796 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 CCNYL3P0C7X3 344 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 AKT1P31749 480 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 ARCN1P48444 511 aaKnown RBP18.84■□□□□ 0.61
COL11A2-204ENST00000395194 FOXK1P85037 733 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 TAZQ16635 292 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 LDLRAP1Q5SW96 308 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 FNBP1LQ5T0N5 605 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 PWWP2BQ6NUJ5 590 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 DDHD1Q8NEL9 900 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 QKIQ96PU8 341 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL11A2-204ENST00000395194 FCRL5Q96RD9 977 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 AKIRIN1Q9H9L7 192 aaPredicted RBP18.84■□□□□ 0.61
COL11A2-204ENST00000395194 LHX9Q9NQ69 397 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 RSPH14Q9UHP6 348 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 RARRES3Q9UL19 164 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 PADI1Q9ULC6 663 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 TFR2Q9UP52 801 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 PLAAQ9Y263 795 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 ARL5AQ9Y689 179 aa18.84■□□□□ 0.61
COL11A2-204ENST00000395194 SPTAN1Q13813 2472 aaKnown RBP18.83■□□□□ 0.61
COL11A2-204ENST00000395194 PIKFYVEQ9Y2I7 2098 aa18.83■□□□□ 0.61
COL11A2-204ENST00000395194 HLA-DPA1P20036 260 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms