RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 KMT5CQ86Y97 462 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 ZGRF1Q86YA3 2104 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 HPS6Q86YV9 775 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 TMEM126BQ8IUX1 230 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 ENDOVQ8N8Q3 282 aaKnown RBP15.48■□□□□ 0.07
SNCA-205ENST00000394991 GLIS1Q8NBF1 620 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 ANKRD20A12PQ8NF67 263 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 ZNF501Q96CX3 271 aaPredicted RBP15.48■□□□□ 0.07
SNCA-205ENST00000394991 TRIB3Q96RU7 358 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 RANBP9Q96S59 729 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 SMAD5Q99717 465 aaKnown RBP15.48■□□□□ 0.07
SNCA-205ENST00000394991 HSD3B7Q9H2F3 369 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 MRPL47Q9HD33 250 aaKnown RBP15.48■□□□□ 0.07
SNCA-205ENST00000394991 ASF1BQ9NVP2 202 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 SLC5A6Q9Y289 635 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 ZNF711Q9Y462 761 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 FBN2P35556 2912 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 OTOGQ6ZRI0 2925 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 SVILO95425 2214 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 F8P00451 2351 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 TLCD2A6NGC4 264 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 MYBL1P10243 752 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 BPIP17213 487 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 TUBB4BP68371 445 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 RAPSNQ13702 412 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 TUBB2AQ13885 445 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 DPYSL3Q14195 570 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 PIGHQ14442 188 aaPredicted RBP15.47■□□□□ 0.07
SNCA-205ENST00000394991 PCM1Q15154 2024 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 RPE65Q16518 533 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 PLEKHN1Q494U1 663 aaPredicted RBP15.47■□□□□ 0.07
SNCA-205ENST00000394991 DNTTIP2Q5QJE6 756 aaKnown RBP15.47■□□□□ 0.07
SNCA-205ENST00000394991 PLEKHS1Q5SXH7 462 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 CCDC122Q5T0U0 273 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 NUP210LQ5VU65 1888 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 TRAPPC5Q8IUR0 188 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 ZBTB2Q8N680 514 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 CNTD1Q8N815 330 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 NIPA2Q8N8Q9 360 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 TRIM11Q96F44 468 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 C5orf34Q96MH7 638 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 TUBB2BQ9BVA1 445 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 ISCUQ9H1K1 167 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 GPR83Q9NYM4 423 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 TCFL5Q9UL49 500 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 SNX7Q9UNH6 387 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 SRPK3Q9UPE1 567 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 ANKRD12Q6UB98 2062 aa15.47■□□□□ 0.07
SNCA-205ENST00000394991 OR5K3A6NET4 321 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 CAPN1P07384 714 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 RAB40ALP0C0E4 278 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 PRKCIP41743 596 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 ARL4DP49703 201 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 VAV2P52735 878 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 HSD11B2P80365 405 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 MYL5Q02045 173 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 GBE1Q04446 702 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 SLC10A2Q12908 348 aaPredicted RBP15.46■□□□□ 0.07
SNCA-205ENST00000394991 ABRQ12979 859 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 ZBTB17Q13105 803 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 ATP13A4Q4VNC1 1196 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 ZRANB3Q5FWF4 1079 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 CCDC183Q5T5S1 534 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 FBXO38Q6PIJ6 1188 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 FAM198BQ6UWH4 519 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 FAM83HQ6ZRV2 1179 aaPredicted RBP15.46■□□□□ 0.07
SNCA-205ENST00000394991 CPNE8Q86YQ8 564 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 DSELQ8IZU8 1212 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 CISD2Q8N5K1 135 aaKnown RBP15.46■□□□□ 0.07
SNCA-205ENST00000394991 PPM1MQ96MI6 270 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 LRFN5Q96NI6 719 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 CD180Q99467 661 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 ADGRE3Q9BY15 652 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 KCND1Q9NSA2 647 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 HAUS2Q9NVX0 235 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 PSMD13Q9UNM6 376 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 DOCK10Q96BY6 2186 aa15.46■□□□□ 0.07
SNCA-205ENST00000394991 UBA6A0AVT1 1052 aaPredicted RBP15.45■□□□□ 0.06
SNCA-205ENST00000394991 KCNK1O00180 336 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 MEN1O00255 615 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 DDX3YO15523 660 aaKnown RBP15.45■□□□□ 0.06
SNCA-205ENST00000394991 MBD3O95983 291 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 RORAP35398 523 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 HALP42357 657 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 ATP1A4Q13733 1029 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 PLCL1Q15111 1095 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 SASS6Q6UVJ0 657 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 MED25Q71SY5 747 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 IQCKQ8N0W5 287 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 TTC30BQ8N4P2 665 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 TMEM102Q8N9M5 508 aaPredicted RBP15.45■□□□□ 0.06
SNCA-205ENST00000394991 HDAC11Q96DB2 347 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 VPS35Q96QK1 796 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 NLNQ9BYT8 704 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 MAGEE1Q9HCI5 957 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 LATS2Q9NRM7 1088 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 RAD18Q9NS91 495 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 AIPL1Q9NZN9 384 aa15.45■□□□□ 0.06
SNCA-205ENST00000394991 G3BP2Q9UN86 482 aaKnown RBP15.45■□□□□ 0.06
SNCA-205ENST00000394991 CNTRLQ7Z7A1 2325 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms