RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 LYPLAL1Q5VWZ2 237 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 ARMC3Q5W041 872 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 IYDQ6PHW0 289 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 PACS1Q6VY07 963 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 CERS6Q6ZMG9 384 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 ZNF761Q86XN6 746 aaPredicted RBP19.56■□□□□ 0.72
SNCA-203ENST00000394986 PDIK1LQ8N165 341 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 Q8N9G6 341 aaPredicted RBP19.56■□□□□ 0.72
SNCA-203ENST00000394986 OR2L2Q8NH16 312 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 MAPK15Q8TD08 544 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 EBNA1BP2Q99848 306 aaKnown RBP19.56■□□□□ 0.72
SNCA-203ENST00000394986 TUBB2BQ9BVA1 445 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 SYNDIG1Q9H7V2 258 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 LRIT1Q9P2V4 623 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 PSMD13Q9UNM6 376 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 WASF3Q9UPY6 502 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 CHMP2BQ9UQN3 213 aa19.56■□□□□ 0.72
SNCA-203ENST00000394986 UTP11Q9Y3A2 253 aaKnown RBP19.56■□□□□ 0.72
SNCA-203ENST00000394986 GOLGA4Q13439 2230 aaKnown RBP19.55■□□□□ 0.72
SNCA-203ENST00000394986 CTAGE15A4D2H0 777 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 MGAT4DA6NG13 374 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 OR52A4PA6NMU1 304 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 SMAPO00193 183 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 PPM1DO15297 605 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 OPA1O60313 960 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 USP1O94782 785 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 TRIM16O95361 564 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 GP1BAP07359 652 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 CTAGE8P0CG41 777 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 GLB1P16278 677 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 PGAM1P18669 254 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 IDSP22304 550 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 ELK3P41970 407 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 ARL4CP56559 192 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 INSM1Q01101 510 aaPredicted RBP19.55■□□□□ 0.72
SNCA-203ENST00000394986 DMPKQ09013 629 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 CALCOCO2Q13137 446 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 CRYMQ14894 314 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 CTAGE6Q86UF2 777 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 ANKMY2Q8IV38 441 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 CTAGE4Q8IX94 777 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 CFAP36Q96G28 342 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 LINC00615Q96LM1 132 aaPredicted RBP19.55■□□□□ 0.72
SNCA-203ENST00000394986 WHRNQ9P202 907 aa19.55■□□□□ 0.72
SNCA-203ENST00000394986 DNMT3AQ9Y6K1 912 aaPredicted RBP19.55■□□□□ 0.72
SNCA-203ENST00000394986 PRAMEF33A0A0G2JMD5 474 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 ESYT3A0FGR9 886 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 FAM149AA5PLN7 773 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 NUDT21O43809 227 aaKnown RBP19.54■□□□□ 0.72
SNCA-203ENST00000394986 AP2A2O94973 939 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 BIRC2Q13490 618 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 FASTKD3Q14CZ7 662 aaKnown RBP19.54■□□□□ 0.72
SNCA-203ENST00000394986 HES3Q5TGS1 186 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 NEPROQ6NW34 567 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 NAPRTQ6XQN6 538 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 MMGT1Q8N4V1 131 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 BBOF1Q8ND07 529 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 MNS1Q8NEH6 495 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 LKAAEAR1Q8TD35 194 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 TTC1Q99614 292 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 RAB17Q9H0T7 212 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 ABCG4Q9H172 646 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 PLAC1Q9HBJ0 212 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 KLK13Q9UKR3 277 aa19.54■□□□□ 0.72
SNCA-203ENST00000394986 RHPN2P1A8MT19 583 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 POLBP06746 335 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 ITGB6P18564 788 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 TTPAP49638 278 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 CCL7P80098 99 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 PDIA2Q13087 525 aaKnown RBP19.53■□□□□ 0.72
SNCA-203ENST00000394986 CLCA4Q14CN2 919 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 LONRF1Q17RB8 773 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 ZNF658BQ4V348 819 aaPredicted RBP19.53■□□□□ 0.72
SNCA-203ENST00000394986 ZNF470Q6ECI4 717 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 MRNIPQ6NTE8 343 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 CCNJLQ8IV13 435 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 CFAP206Q8IYR0 622 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNCA-203ENST00000394986 OR6C4Q8NGE1 309 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 HM13Q8TCT9 377 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 CCM2Q9BSQ5 444 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 SCNM1Q9BWG6 230 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 C20orf96Q9NUD7 363 aaPredicted RBP19.53■□□□□ 0.72
SNCA-203ENST00000394986 ZNF624Q9P2J8 865 aaPredicted RBP19.53■□□□□ 0.72
SNCA-203ENST00000394986 FAM169AQ9Y6X4 670 aa19.53■□□□□ 0.72
SNCA-203ENST00000394986 A0A1W2PQM1 296 aa19.52■□□□□ 0.72
SNCA-203ENST00000394986 UBA6A0AVT1 1052 aaPredicted RBP19.52■□□□□ 0.72
SNCA-203ENST00000394986 IQCF5A8MTL0 148 aa19.52■□□□□ 0.72
SNCA-203ENST00000394986 KCNJ13O60928 360 aa19.52■□□□□ 0.72
SNCA-203ENST00000394986 NDUFS3O75489 264 aa19.52■□□□□ 0.72
SNCA-203ENST00000394986 RPLP0P05388 317 aaKnown RBP19.52■□□□□ 0.72
SNCA-203ENST00000394986 SLC2A4P14672 509 aa19.52■□□□□ 0.72
SNCA-203ENST00000394986 PPARGP37231 505 aaPredicted RBP19.52■□□□□ 0.72
SNCA-203ENST00000394986 PLTPP55058 493 aa19.52■□□□□ 0.72
SNCA-203ENST00000394986 OR1D5P58170 312 aa19.52■□□□□ 0.72
SNCA-203ENST00000394986 E2F1Q01094 437 aa19.52■□□□□ 0.72
SNCA-203ENST00000394986 HHEXQ03014 270 aa19.52■□□□□ 0.72
SNCA-203ENST00000394986 THOC5Q13769 683 aaKnown RBP19.52■□□□□ 0.72
SNCA-203ENST00000394986 TYSND1Q2T9J0 566 aa19.52■□□□□ 0.72
SNCA-203ENST00000394986 ZNF789Q5FWF6 425 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms