RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CBX8Q9HC52 389 aa20.68■□□□□ 0.9
TRAF4-203ENST00000394925 ACSS2Q9NR19 701 aa20.68■□□□□ 0.9
TRAF4-203ENST00000394925 PSMD13Q9UNM6 376 aa20.68■□□□□ 0.9
TRAF4-203ENST00000394925 FARSAQ9Y285 508 aaKnown RBP20.68■□□□□ 0.9
TRAF4-203ENST00000394925 CREBBPQ92793 2442 aa20.68■□□□□ 0.9
TRAF4-203ENST00000394925 A0A1W2PQJ5 194 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 SEMA7AO75326 666 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 NDST3O95803 873 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 MT-CYBP00156 380 aaPredicted RBP20.67■□□□□ 0.9
TRAF4-203ENST00000394925 PDE1BQ01064 536 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 PLCL1Q15111 1095 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 RPE65Q16518 533 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 KLHL35Q6PF15 583 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 AMZ2Q86W34 360 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 BPHLQ86WA6 291 aaPredicted RBP20.67■□□□□ 0.9
TRAF4-203ENST00000394925 TTC30BQ8N4P2 665 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 TADA1Q96BN2 335 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 ING2Q9H160 280 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 MAP4K5Q9Y4K4 846 aa20.67■□□□□ 0.9
TRAF4-203ENST00000394925 PCDHGA9Q9Y5G4 932 aaKnown RBP20.67■□□□□ 0.9
TRAF4-203ENST00000394925 CACNA1DQ01668 2161 aa20.66■□□□□ 0.9
TRAF4-203ENST00000394925 DNTTIP2Q5QJE6 756 aaKnown RBP20.66■□□□□ 0.9
TRAF4-203ENST00000394925 NPNTQ6UXI9 565 aa20.66■□□□□ 0.9
TRAF4-203ENST00000394925 B4GALNT4Q76KP1 1039 aa20.66■□□□□ 0.9
TRAF4-203ENST00000394925 BRSK1Q8TDC3 778 aa20.66■□□□□ 0.9
TRAF4-203ENST00000394925 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.66■□□□□ 0.9
TRAF4-203ENST00000394925 MR1Q95460 341 aa20.66■□□□□ 0.9
TRAF4-203ENST00000394925 SRPK1Q96SB4 655 aaKnown RBP20.66■□□□□ 0.9
TRAF4-203ENST00000394925 MLXIPLQ9NP71 852 aa20.66■□□□□ 0.9
TRAF4-203ENST00000394925 UBP1Q9NZI7 540 aa20.66■□□□□ 0.9
TRAF4-203ENST00000394925 UVRAGQ9P2Y5 699 aa20.66■□□□□ 0.9
TRAF4-203ENST00000394925 SPTBP11277 2137 aa20.66■□□□□ 0.9
TRAF4-203ENST00000394925 HIVEP3Q5T1R4 2406 aa20.66■□□□□ 0.9
TRAF4-203ENST00000394925 UBA6A0AVT1 1052 aaPredicted RBP20.65■□□□□ 0.9
TRAF4-203ENST00000394925 LRRD1A4D1F6 860 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 GOLGA6L22H0YM25 854 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 KCNJ13O60928 360 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 CPNE3O75131 537 aaKnown RBP20.65■□□□□ 0.9
TRAF4-203ENST00000394925 PMPCBO75439 489 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 SCRG1O75711 98 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 POP7O75817 140 aaKnown RBP20.65■□□□□ 0.9
TRAF4-203ENST00000394925 RNF224P0DH78 156 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 HSD11B2P80365 405 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 ZBED6P86452 979 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 LAMB3Q13751 1172 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 PDK1Q15118 436 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 GPR19Q15760 415 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 FAM83HQ6ZRV2 1179 aaPredicted RBP20.65■□□□□ 0.9
TRAF4-203ENST00000394925 KMT5CQ86Y97 462 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 TMEM126BQ8IUX1 230 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 D2HGDHQ8N465 521 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 RASGEF1AQ8N9B8 481 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 XPO4Q9C0E2 1151 aaKnown RBP20.65■□□□□ 0.9
TRAF4-203ENST00000394925 GLOD4Q9HC38 313 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 TMEM63CQ9P1W3 806 aa20.65■□□□□ 0.9
TRAF4-203ENST00000394925 TLCD2A6NGC4 264 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 APOL1O14791 398 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 UGT1A9O60656 530 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 SORBS2O94875 1100 aaKnown RBP20.64■□□□□ 0.89
TRAF4-203ENST00000394925 MBD3O95983 291 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 H2AFZP0C0S5 128 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 UGT1A6P19224 532 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 UGT1A1P22309 533 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 UGT1A4P22310 534 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 PTGIRP43119 386 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 CTSCP53634 463 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 TUBB4BP68371 445 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 DMPKQ09013 629 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 GPS2Q13227 327 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 TUBB2AQ13885 445 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 NFE2L1Q14494 772 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 CHRNA6Q15825 494 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 SLC9A4Q6AI14 798 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 H2AFVQ71UI9 128 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 CD180Q99467 661 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 TUBB2BQ9BVA1 445 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 MAK16Q9BXY0 300 aaKnown RBP20.64■□□□□ 0.89
TRAF4-203ENST00000394925 UGT1A7Q9HAW7 530 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 UGT1A10Q9HAW8 530 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 UGT1A8Q9HAW9 530 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 IL26Q9NPH9 171 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 KCND1Q9NSA2 647 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 IMP3Q9NV31 184 aaKnown RBP20.64■□□□□ 0.89
TRAF4-203ENST00000394925 HRASLS2Q9NWW9 162 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 LUZP4Q9P127 313 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 CAPN11Q9UMQ6 739 aa20.64■□□□□ 0.89
TRAF4-203ENST00000394925 CFAP20Q9Y6A4 193 aaKnown RBP20.64■□□□□ 0.89
TRAF4-203ENST00000394925 A1L4Q6 167 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 OR5K3A6NET4 321 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 PPP1R12AO14974 1030 aaPredicted RBP20.63■□□□□ 0.89
TRAF4-203ENST00000394925 GPR39O43194 453 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 PBLDP30039 288 aaPredicted RBP20.63■□□□□ 0.89
TRAF4-203ENST00000394925 HMGCLP35914 325 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 MESDQ14696 234 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 NOMO1Q15155 1222 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 INPP5JQ15735 1006 aaPredicted RBP20.63■□□□□ 0.89
TRAF4-203ENST00000394925 SLC14A2Q15849 920 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 PRR30Q53SZ7 412 aaPredicted RBP20.63■□□□□ 0.89
TRAF4-203ENST00000394925 PAPD7Q5XG87 772 aaKnown RBP20.63■□□□□ 0.89
TRAF4-203ENST00000394925 TMEM220Q6QAJ8 160 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms