RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CCNYL2Q5T2Q4 361 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 FAM91A1Q658Y4 838 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 HMBOX1Q6NT76 420 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 ZCCHC8Q6NZY4 707 aaKnown RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 UBASH3BQ8TF42 649 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 OR52E6Q96RD3 313 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 PRKD2Q9BZL6 878 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 SYTL2Q9HCH5 934 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 HCSTQ9UBK5 93 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 POLG2Q9UHN1 485 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 PDE10AQ9Y233 779 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 PTCH2Q9Y6C5 1203 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 C2orf81A6NN90 581 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 E9PAM4 449 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 RAD51BO15315 384 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 DUSP11O75319 330 aaKnown RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 INMTO95050 263 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 ANGPTL1O95841 491 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 ANXA6P08133 673 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 ALDOCP09972 364 aaKnown RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 IMPDH2P12268 514 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 BCAP31P51572 246 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 HSPA14Q0VDF9 509 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 TIGD7Q6NT04 549 aaPredicted RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 CCDC117Q8IWD4 279 aaPredicted RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 CHERPQ8IWX8 916 aaKnown RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 TBC1D21Q8IYX1 336 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 SLC22A15Q8IZD6 547 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 OR56A4Q8NGH8 313 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 MCFD2Q8NI22 146 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 PYCR2Q96C36 320 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 IMPAD1Q9NX62 359 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 EIF3LQ9Y262 564 aaKnown RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 EVPLLA8MZ36 301 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 ACOT8O14734 319 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 TOMM70O94826 608 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 MATN1P21941 496 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 CDKN1CP49918 316 aaPredicted RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 GATMP50440 423 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 IL2P60568 153 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 EPS8Q12929 822 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 TP53BP2Q13625 1128 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 CYP27C1Q4G0S4 372 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 PABPC1LQ4VXU2 614 aaKnown RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 STXBP5Q5T5C0 1151 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 DCLRE1AQ6PJP8 1040 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 MFSD6LQ8IWD5 586 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 FRS2Q8WU20 508 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 HOPXQ9BPY8 73 aaPredicted RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 EIF2B3Q9NR50 452 aaKnown RBP13.07□□□□□ -0.32
NFKB1-202ENST00000394820 SH3BP4Q9P0V3 963 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 OGDHLQ9ULD0 1010 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 GIT1Q9Y2X7 761 aa13.07□□□□□ -0.32
NFKB1-202ENST00000394820 CLDN25C9JDP6 229 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 OR1I1O60431 355 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 MITFO75030 526 aaPredicted RBP13.06□□□□□ -0.32
NFKB1-202ENST00000394820 IL1BP01584 269 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 G6PDP11413 515 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 IDO1P14902 403 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 GRK3P35626 688 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 OPRL1P41146 370 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 CDK18Q07002 472 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 TUSC3Q13454 348 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 BOP1Q14137 746 aaKnown RBP13.06□□□□□ -0.32
NFKB1-202ENST00000394820 PCBP1Q15365 356 aaKnown RBP eCLIP13.06□□□□□ -0.32
NFKB1-202ENST00000394820 LRRC73Q5JTD7 316 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 NANOGP8Q6NSW7 305 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 GPR153Q6NV75 609 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 FAM151BQ6UXP7 276 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 SLC22A16Q86VW1 577 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 HIPK1Q86Z02 1210 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 PTERQ96BW5 349 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 LHPPQ9H008 270 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 NANOGQ9H9S0 305 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 TMEM161AQ9NX61 479 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 MAP10Q9P2G4 905 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 CRLS1Q9UJA2 301 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 PCDHB9Q9Y5E1 797 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 MAP1BP46821 2468 aaKnown RBP13.06□□□□□ -0.32
NFKB1-202ENST00000394820 HAS3O00219 553 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 SNPHO15079 494 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 NPHS1O60500 1241 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 C1RP00736 705 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 IMPDH1P20839 514 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 GTF2E2P29084 291 aaKnown RBP13.06□□□□□ -0.32
NFKB1-202ENST00000394820 SCNN1AP37088 669 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 ST13P50502 369 aaKnown RBP13.06□□□□□ -0.32
NFKB1-202ENST00000394820 SFSWAPQ12872 951 aaKnown RBP13.06□□□□□ -0.32
NFKB1-202ENST00000394820 GRM2Q14416 872 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 ZNF829Q3KNS6 432 aaPredicted RBP13.06□□□□□ -0.32
NFKB1-202ENST00000394820 POM121L1PQ3SYA9 428 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 GTDC1Q4AE62 458 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 TTC23Q5W5X9 447 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 ITIH5Q86UX2 942 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 OR52B6Q8NGF0 335 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 FAR1Q8WVX9 515 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 SLC47A1Q96FL8 570 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 REXO5Q96IC2 774 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms