RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ANKRD60Q9BZ19 345 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 GKN1Q9NS71 199 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 SH3BP4Q9P0V3 963 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 CIDEBQ9UHD4 219 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 GMPPBQ9Y5P6 360 aa15.95■□□□□ 0.14
PCDH1-203ENST00000394536 TCRBV3S1A0A5B6 114 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 ELOVL7A1L3X0 281 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 RGS5O15539 181 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 MYO1DO94832 1006 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 DIRAS1O95057 198 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 SLC25A14O95258 325 aaPredicted RBP15.94■□□□□ 0.14
PCDH1-203ENST00000394536 UMPSP11172 480 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 JAK1P23458 1154 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 PGFP49763 221 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 CYP4F2P78329 520 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 ZNF33AQ06730 810 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 CYP4F3Q08477 520 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 PLA2G4EQ3MJ16 856 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 R3HCC1LQ7Z5L2 792 aaKnown RBP15.94■□□□□ 0.14
PCDH1-203ENST00000394536 ADAMTSL2Q86TH1 951 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 ANKFN1Q8N957 763 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 EPB41L1Q9H4G0 881 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 TRPM5Q9NZQ8 1165 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 MYCLP1P12525 358 aaPredicted RBP15.94■□□□□ 0.14
PCDH1-203ENST00000394536 ST13P50502 369 aaKnown RBP15.94■□□□□ 0.14
PCDH1-203ENST00000394536 YBEYP58557 167 aaPredicted RBP15.94■□□□□ 0.14
PCDH1-203ENST00000394536 CRY1Q16526 586 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 ANKDD1AQ495B1 522 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 VARS2Q5ST30 1063 aaKnown RBP15.94■□□□□ 0.14
PCDH1-203ENST00000394536 BLOC1S3Q6QNY0 202 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 CCDC103Q8IW40 242 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 PHACTR4Q8IZ21 702 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 KLHL23Q8NBE8 558 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 FNDC8Q8TC99 324 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 KIAA1191Q96A73 305 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 NODALQ96S42 347 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 NUP214P35658 2090 aaPredicted RBP15.94■□□□□ 0.14
PCDH1-203ENST00000394536 SHROOM3Q8TF72 1996 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 FADS2O95864 444 aaKnown RBP15.94■□□□□ 0.14
PCDH1-203ENST00000394536 ARSFP54793 590 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 VEPH1Q14D04 833 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 ARMC12Q5T9G4 340 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 ZNF549Q6P9A3 640 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 SCD5Q86SK9 330 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 HS3ST5Q8IZT8 346 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 PACRGLQ8N7B6 248 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 INTS10Q9NVR2 710 aaKnown RBP15.94■□□□□ 0.14
PCDH1-203ENST00000394536 IMPAD1Q9NX62 359 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 MAP10Q9P2G4 905 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 PCDHB7Q9Y5E2 793 aa15.94■□□□□ 0.14
PCDH1-203ENST00000394536 ARVCFO00192 962 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 ATE1O95260 518 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 DNAJB1P25685 340 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 RFC2P35250 354 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 GTF2H2Q13888 395 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 HMBOX1Q6NT76 420 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 GTF2H2CQ6P1K8 395 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 TAGAPQ8N103 731 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 TTC9BQ8N6N2 239 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 NUDT8Q8WV74 236 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 PGAP3Q96FM1 320 aaPredicted RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 TOR3AQ9H497 397 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 NSUN3Q9H649 340 aaKnown RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 NOL6Q9H6R4 1146 aaKnown RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 SPASTQ9UBP0 616 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 CNOT11Q9UKZ1 510 aaKnown RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 ABT1Q9ULW3 272 aaKnown RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 TPRKBQ9Y3C4 175 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 FAM234BA2RU67 622 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 INSIG1O15503 277 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 GPR39O43194 453 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 RECQL5O94762 991 aaPredicted RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 ANGPTL1O95841 491 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 RAP2AP10114 183 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 DBTP11182 482 aaKnown RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 RECQLP46063 649 aaPredicted RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 GNPDA1P46926 289 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 C18orf21Q32NC0 220 aaPredicted RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 PAGE2Q7Z2X7 111 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 NECAB2Q7Z6G3 386 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 HEATR4Q86WZ0 1026 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 ZNF280BQ86YH2 543 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 SYTL1Q8IYJ3 562 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 TMEM132CQ8N3T6 1108 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 LIX1Q8N485 282 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 APOLD1Q96LR9 279 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 POLR3BQ9NW08 1133 aaPredicted RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 hCG_2039718K7EN88 272 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 DFNA5O60443 496 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 SEC24AO95486 1093 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 RPL17P18621 184 aaKnown RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 FMO3P31513 532 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 SEPHS1P49903 392 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 GRB14Q14449 540 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 ATXN7L2Q5T6C5 722 aaPredicted RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 MINDY1Q8N5J2 469 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 SMYD1Q8NB12 490 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 SLC13A3Q8WWT9 602 aa15.93■□□□□ 0.14
PCDH1-203ENST00000394536 TRMT13Q9NUP7 481 aaKnown RBP15.93■□□□□ 0.14
PCDH1-203ENST00000394536 PADI4Q9UM07 663 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms