RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 VIPR2P41587 438 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 HTR6P50406 440 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 ARSIQ5FYB1 569 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 GPRC6AQ5T6X5 926 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 ADGRD2Q7Z7M1 963 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 PBXIP1Q96AQ6 731 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 ISG20Q96AZ6 181 aaKnown RBP14.86□□□□□ -0.03
GPC3-202ENST00000394299 ZNF707Q96C28 371 aaPredicted RBP14.86□□□□□ -0.03
GPC3-202ENST00000394299 RSPRY1Q96DX4 576 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 ERLEC1Q96DZ1 483 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 ZFYVE19Q96K21 471 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 LYSMD1Q96S90 227 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 C1orf50Q9BV19 199 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 C1QTNF3Q9BXJ4 246 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 TRIM8Q9BZR9 551 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 ERVW-1Q9UQF0 538 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 PIKFYVEQ9Y2I7 2098 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 MTCL1Q9Y4B5 1905 aaKnown RBP14.86□□□□□ -0.03
GPC3-202ENST00000394299 NR5A2O00482 541 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 NRP2O60462 931 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 LEFTY1O75610 366 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 ATP6V1C1P21283 382 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 RPS3P23396 243 aaKnown RBP eCLIP14.85□□□□□ -0.034e-42■■■■□ 20.5
GPC3-202ENST00000394299 PIK3CGP48736 1102 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 MRPS22P82650 360 aaKnown RBP14.85□□□□□ -0.03
GPC3-202ENST00000394299 ZNF648Q5T619 568 aaPredicted RBP14.85□□□□□ -0.03
GPC3-202ENST00000394299 TXNDC11Q6PKC3 985 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 USP45Q70EL2 814 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 C12orf40Q86WS4 652 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 ZBTB2Q8N680 514 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 PDLIM5Q96HC4 596 aaKnown RBP14.85□□□□□ -0.03
GPC3-202ENST00000394299 ZMYM5Q9UJ78 669 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 OR7A17O14581 309 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 MRASO14807 208 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 CTSLP07711 333 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 LBPP18428 481 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 STX5Q13190 355 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 FLOT2Q14254 428 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 AAGABQ6PD74 315 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 TMC5Q6UXY8 1006 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 GDPD4Q6W3E5 623 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 GPRIN3Q6ZVF9 776 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 GOLGA7Q7Z5G4 137 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 METTL3Q86U44 580 aaKnown RBP14.85□□□□□ -0.03
GPC3-202ENST00000394299 CBARPQ8N350 705 aaPredicted RBP14.85□□□□□ -0.03
GPC3-202ENST00000394299 BHLHE22Q8NFJ8 381 aaPredicted RBP14.85□□□□□ -0.03
GPC3-202ENST00000394299 OR56A4Q8NGH8 313 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 MRGPRX3Q96LB0 322 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 SERPINI1Q99574 410 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 CPEB1Q9BZB8 566 aaKnown RBP14.85□□□□□ -0.03
GPC3-202ENST00000394299 MAP10Q9P2G4 905 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 PPIL1Q9Y3C6 166 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 TRANK1O15050 2925 aa14.85□□□□□ -0.03
GPC3-202ENST00000394299 ANTXRLA6NF34 631 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 MAP3K7O43318 606 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 DNAJA2O60884 412 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 PFKLP17858 780 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 POLR2EP19388 210 aaKnown RBP14.84□□□□□ -0.03
GPC3-202ENST00000394299 CAPN3P20807 821 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 ME2P23368 584 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 CCR7P32248 378 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 STX1BP61266 288 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 PLA2G4EQ3MJ16 856 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 HSD11B1LQ7Z5J1 315 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 MYO1HQ8N1T3 1032 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 FRS2Q8WU20 508 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 HERVK_113Q902F9 699 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 MCCC1Q96RQ3 725 aaPredicted RBP14.84□□□□□ -0.03
GPC3-202ENST00000394299 TUBGCP5Q96RT8 1024 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 MYCBPQ99417 103 aaPredicted RBP14.84□□□□□ -0.03
GPC3-202ENST00000394299 MRPS23Q9Y3D9 190 aaKnown RBP14.84□□□□□ -0.03
GPC3-202ENST00000394299 PRORSD1PA6NEY8 169 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 AGAP14A8MT82 685 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 CAPN1P07384 714 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 UROSP10746 265 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 DDX6P26196 483 aaKnown RBP eCLIP14.84□□□□□ -0.033e-17■■■□□ 15.2
GPC3-202ENST00000394299 SPINT3P49223 89 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 AAK1Q2M2I8 961 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 GPR33Q49SQ1 333 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 ANO7Q6IWH7 933 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 ELMSAN1Q6PJG2 1045 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 SERPINA13PQ6UXR4 307 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 IZUMO2Q6UXV1 221 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 MACC1Q6ZN28 852 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 Q6ZSR9 355 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 Q6ZVL8 140 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 UBE2Q1Q7Z7E8 422 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 DHDDSQ86SQ9 333 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 PPFIBP2Q8ND30 876 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 OR4F6Q8NGB9 312 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 UCMAQ8WVF2 138 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 ATP6V1E2Q96A05 226 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 EGFL8Q99944 293 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 HTATIP2Q9BUP3 242 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 LATS2Q9NRM7 1088 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 NUDT4Q9NZJ9 180 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 SCN8AQ9UQD0 1980 aa14.84□□□□□ -0.03
GPC3-202ENST00000394299 ACOT8O14734 319 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 MLYCDO95822 493 aa14.83□□□□□ -0.03
GPC3-202ENST00000394299 DGKAP23743 735 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms