RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 VPS9D1Q9Y2B5 631 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 CARNS1A5YM72 827 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 WASH3PC4AMC7 463 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 PRRT4C9JH25 899 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 E7ENX8 843 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 CRCPO75575 148 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 POLR2EP19388 210 aaKnown RBP14.1□□□□□ -0.15
RNF41-202ENST00000394013 CCR7P32248 378 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 NRIP1P48552 1158 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 RPL26P61254 145 aaKnown RBP14.1□□□□□ -0.15
RNF41-202ENST00000394013 SATB1Q01826 763 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 ART3Q13508 389 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 TAF11Q15544 211 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 GPRC6AQ5T6X5 926 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 ELMSAN1Q6PJG2 1045 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 USP45Q70EL2 814 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 FRA10AC1Q70Z53 315 aa14.1□□□□□ -0.15
RNF41-202ENST00000394013 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.1□□□□□ -0.15
RNF41-202ENST00000394013 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.1□□□□□ -0.15
RNF41-202ENST00000394013 MCCC1Q96RQ3 725 aaPredicted RBP14.1□□□□□ -0.15
RNF41-202ENST00000394013 SYCE1LA8MT33 242 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 NR5A2O00482 541 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 OR7A17O14581 309 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 PFDN6O15212 129 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 FFAR2O15552 330 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 XYLBO75191 536 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 FGF4P08620 206 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 GPX3P22352 226 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 MAPK8P45983 427 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 GTF2A1P52655 376 aaPredicted RBP14.09□□□□□ -0.15
RNF41-202ENST00000394013 GPM6BQ13491 265 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 GRIN2CQ14957 1233 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 ZNF423Q2M1K9 1284 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 ZXDCQ2QGD7 858 aaPredicted RBP14.09□□□□□ -0.15
RNF41-202ENST00000394013 VPS26BQ4G0F5 336 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 HABP4Q5JVS0 413 aaKnown RBP14.09□□□□□ -0.15
RNF41-202ENST00000394013 GRAMD4Q6IC98 578 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 STK40Q8N2I9 435 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 ZBTB2Q8N680 514 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 FAR2Q96K12 515 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 MCOLN1Q9GZU1 580 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 PCDHAC1Q9H158 963 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 PCDH12Q9NPG4 1184 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 DUS2Q9NX74 493 aaKnown RBP14.09□□□□□ -0.15
RNF41-202ENST00000394013 STK39Q9UEW8 545 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 GNPTGQ9UJJ9 305 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 APPL1Q9UKG1 709 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 PCDHGA7Q9Y5G6 932 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 TMEM202A6NGA9 273 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 EPOPA6NHQ4 379 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 SPINT3P49223 89 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 SQLEQ14534 574 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 PIGGQ5H8A4 983 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 FAM78AQ5JUQ0 283 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 LPCAT4Q643R3 524 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 CERS6Q6ZMG9 384 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 BNC2Q6ZN30 1099 aaPredicted RBP14.09□□□□□ -0.15
RNF41-202ENST00000394013 GOLGA7Q7Z5G4 137 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 AFAP1L2Q8N4X5 818 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 LILRA3Q8N6C8 439 aaPredicted RBP14.09□□□□□ -0.15
RNF41-202ENST00000394013 GDPD5Q8WTR4 605 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 ISG20Q96AZ6 181 aaKnown RBP14.09□□□□□ -0.15
RNF41-202ENST00000394013 LYSMD1Q96S90 227 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 SPATA16Q9BXB7 569 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 IGFLR1Q9H665 355 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 S100A14Q9HCY8 104 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 LATS2Q9NRM7 1088 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 CACNA2D2Q9NY47 1150 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 COQ6Q9Y2Z9 468 aa14.09□□□□□ -0.15
RNF41-202ENST00000394013 FFAR3O14843 346 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 GPR42O15529 346 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 DNAJA2O60884 412 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 CISD3P0C7P0 127 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 TIMP2P16035 220 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 CAPN3P20807 821 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 SOX11P35716 441 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 HSPA14Q0VDF9 509 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 CACUL1Q86Y37 369 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 TMEM79Q9BSE2 394 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 FARSBQ9NSD9 589 aaKnown RBP14.08□□□□□ -0.15
RNF41-202ENST00000394013 ADA2Q9NZK5 511 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 PCDHB1Q9Y5F3 818 aa14.08□□□□□ -0.15
RNF41-202ENST00000394013 OR2AG2A6NM03 316 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 FADS2P1A8MWK0 482 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 TULP3O75386 442 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 CAPN1P07384 714 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 LRP8Q14114 963 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 SHHQ15465 462 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 MMEL1Q495T6 779 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 C6orf163Q5TEZ5 329 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 GPRIN3Q6ZVF9 776 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 OR4F6Q8NGB9 312 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 SKA2Q8WVK7 121 aaPredicted RBP14.08□□□□□ -0.16
RNF41-202ENST00000394013 VPS33AQ96AX1 596 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 EGFL8Q99944 293 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 WRAP53Q9BUR4 548 aaKnown RBP14.08□□□□□ -0.16
RNF41-202ENST00000394013 CPEB1Q9BZB8 566 aaKnown RBP14.08□□□□□ -0.16
RNF41-202ENST00000394013 EFCAB1Q9HAE3 211 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 SUN2Q9UH99 717 aa14.08□□□□□ -0.16
RNF41-202ENST00000394013 C5orf67F2Z3F1 127 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms