RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 BPHLQ86WA6 291 aaPredicted RBP15.04■□□□□ -0
CHMP3-202ENST00000393773 KMT5CQ86Y97 462 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 D2HGDHQ8N465 521 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 ZNF830Q96NB3 372 aaPredicted RBP15.04■□□□□ -0
CHMP3-202ENST00000393773 GPR63Q9BZJ6 419 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 ING2Q9H160 280 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 PIKFYVEQ9Y2I7 2098 aa15.04■□□□□ -0
CHMP3-202ENST00000393773 CSMD1Q96PZ7 3565 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 A1L4Q6 167 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 GPR39O43194 453 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 VCLP18206 1134 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 HALP42357 657 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 CDK18Q07002 472 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 TMEM115Q12893 351 aaPredicted RBP15.03■□□□□ -0
CHMP3-202ENST00000393773 GPR19Q15760 415 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 CHRNA6Q15825 494 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 RPE65Q16518 533 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 FILIP1LQ4L180 1135 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 IZUMO3Q5VZ72 239 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 MAP7D3Q8IWC1 876 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 SLC38A9Q8NBW4 561 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 RAPGEF5Q92565 580 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 ZNF501Q96CX3 271 aaPredicted RBP15.03■□□□□ -0
CHMP3-202ENST00000393773 OLFM3Q96PB7 478 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 RNF157Q96PX1 679 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 CD180Q99467 661 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 SLC25A51Q9H1U9 297 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 ACSS2Q9NR19 701 aa15.03■□□□□ -0
CHMP3-202ENST00000393773 BZW2Q9Y6E2 419 aaKnown RBP15.03■□□□□ -0
CHMP3-202ENST00000393773 A0A1W2PQJ5 194 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 OR5K3A6NET4 321 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 TCP11X1B4DZS4 312 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 SCRG1O75711 98 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 MT-CYBP00156 380 aaPredicted RBP15.02■□□□□ -0
CHMP3-202ENST00000393773 SERPING1P05155 500 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 LPOP22079 712 aaPredicted RBP15.02■□□□□ -0
CHMP3-202ENST00000393773 CA5AP35218 305 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 CTSCP53634 463 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 RPS15P62841 145 aaKnown RBP15.02■□□□□ -0
CHMP3-202ENST00000393773 TUBB4BP68371 445 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 HSD11B2P80365 405 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 MRPL49Q13405 166 aaKnown RBP15.02■□□□□ -0
CHMP3-202ENST00000393773 TUBB2AQ13885 445 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 GTF2H3Q13889 308 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 INPP5JQ15735 1006 aaPredicted RBP15.02■□□□□ -0
CHMP3-202ENST00000393773 DNTTIP2Q5QJE6 756 aaKnown RBP15.02■□□□□ -0
CHMP3-202ENST00000393773 SLC9A4Q6AI14 798 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 JMJD6Q6NYC1 403 aaPredicted RBP15.02■□□□□ -0
CHMP3-202ENST00000393773 NT5DC3Q86UY8 548 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 SPATA22Q8NHS9 363 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 SYN2Q92777 582 aaPredicted RBP15.02■□□□□ -0
CHMP3-202ENST00000393773 AGAP3Q96P47 875 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 TUBB2BQ9BVA1 445 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 BPIFA1Q9NP55 256 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 LUZP4Q9P127 313 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 PSMD13Q9UNM6 376 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 ZNF451Q9Y4E5 1061 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 PCDHGB7Q9Y5F8 929 aa15.02■□□□□ -0
CHMP3-202ENST00000393773 SEC16AO15027 2179 aa15.02□□□□□ -0.01
CHMP3-202ENST00000393773 C3orf70A6NLC5 250 aaPredicted RBP15.01□□□□□ -0.01
CHMP3-202ENST00000393773 ZNF487B1APH4 448 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 NDST3O95803 873 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 MTHFD1P11586 935 aaKnown RBP15.01□□□□□ -0.01
CHMP3-202ENST00000393773 KDELR1P24390 212 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 HMGCLP35914 325 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 PBX1P40424 430 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 CCL11P51671 97 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 AP1B1Q10567 949 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 ABRQ12979 859 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 NFE2L1Q14494 772 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 NR1I3Q14994 352 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 PLCL1Q15111 1095 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 FAM69BQ5VUD6 431 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 SLC6A19Q695T7 634 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 LCN10Q6JVE6 187 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 DUS1LQ6P1R4 473 aaKnown RBP15.01□□□□□ -0.01
CHMP3-202ENST00000393773 ALKBH5Q6P6C2 394 aaKnown RBP15.01□□□□□ -0.01
CHMP3-202ENST00000393773 KLHL35Q6PF15 583 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 FAM198BQ6UWH4 519 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 AMZ2Q86W34 360 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 TMEM126BQ8IUX1 230 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 TTC30BQ8N4P2 665 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 RASGEF1AQ8N9B8 481 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 DDHD1Q8NEL9 900 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 FDCSPQ8NFU4 85 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 MR1Q95460 341 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 LRFN5Q96NI6 719 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 NUDT9Q9BW91 350 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 XPO4Q9C0E2 1151 aaKnown RBP15.01□□□□□ -0.01
CHMP3-202ENST00000393773 NAT10Q9H0A0 1025 aaKnown RBP15.01□□□□□ -0.01
CHMP3-202ENST00000393773 CHST8Q9H2A9 424 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 CBX8Q9HC52 389 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 LATS2Q9NRM7 1088 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 FARSAQ9Y285 508 aaKnown RBP15.01□□□□□ -0.01
CHMP3-202ENST00000393773 BTRCQ9Y297 605 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 HEY1Q9Y5J3 304 aa15.01□□□□□ -0.01
CHMP3-202ENST00000393773 SNRNP200O75643 2136 aaKnown RBP15.01□□□□□ -0.01
CHMP3-202ENST00000393773 SSU72P8A0A1W2PR75 194 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 GAPDHSO14556 408 aaPredicted RBP15□□□□□ -0.01
CHMP3-202ENST00000393773 KCNJ13O60928 360 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms