RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TSTD2Q5T7W7 516 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 NAPRTQ6XQN6 538 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 LDB1Q86U70 411 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 AMZ2Q86W34 360 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 SLITRK4Q8IW52 837 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 TRIM48Q8IWZ4 208 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 MPP5Q8N3R9 675 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 PPHLN1Q8NEY8 458 aaKnown RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 ACTRT1Q8TDG2 376 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 STYXQ8WUJ0 223 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 CPT1BQ92523 772 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 HDAC10Q969S8 669 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 ULK4Q96C45 1275 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 DCUN1D1Q96GG9 259 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 PRR11Q96HE9 360 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 NAF1Q96HR8 494 aaKnown RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 CCDC74BQ96LY2 380 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 COPS8Q99627 209 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 NRTNQ99748 197 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZCCHC2Q9C0B9 1178 aaKnown RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 NRSN2Q9GZP1 204 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 WWP1Q9H0M0 922 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 EIF2B3Q9NR50 452 aaKnown RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 CHRAC1Q9NRG0 131 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 HOMER3Q9NSC5 361 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 RYDENQ9NUL5 291 aaKnown RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZDHHC3Q9NYG2 299 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 MARCH4Q9P2E8 410 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 KLHL3Q9UH77 587 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 NEU2Q9Y3R4 380 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 CFAP47Q6ZTR5 3102 aa7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZNF106Q9H2Y7 1883 aaKnown RBP7.53□□□□□ -1.2
HMGB3P1-201ENST00000393368 TRBV5-4A0A0C4DH59 114 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 KIR2DS5A0A0G2JLQ3 304 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 A0A0G2JNG1 304 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 IGHV5-10-1A0A0J9YXX1 117 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 HEATR9A2RTY3 570 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 A8MU76 341 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 GOLGA8KD6RF30 607 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 GOLGA8TH3BQL2 631 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 H7C0S8 307 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 KIR2DS3K7RE56 304 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 OR1I1O60431 355 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 CPNE6O95741 557 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 GAS8O95995 478 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 VIPP01282 170 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 ATP1B2P14415 290 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 TCP1P17987 556 aaKnown RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 VCLP18206 1134 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 ITGB6P18564 788 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 TPSB2P20231 275 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 ADRA1DP25100 572 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 ETV5P41161 510 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 PREPP48147 710 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 MRPS25P82663 173 aaKnown RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 ZFP36L1Q07352 338 aaKnown RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 DMPKQ09013 629 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 GPR18Q14330 331 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 KIR2DS5Q14953 304 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 TPSAB1Q15661 275 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 SKIDA1Q1XH10 827 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 GPR33Q49SQ1 333 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 BCL7AQ4VC05 210 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 C19orf48Q6RUI8 117 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 SLC9B2Q86UD5 537 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 CAND1Q86VP6 1230 aaKnown RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 CREG2Q8IUH2 290 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 KLHL7Q8IXQ5 586 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 CFAP206Q8IYR0 622 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 CACTIN-AS1Q8N1I8 211 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 OR6P1Q8NGX9 317 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 WDR48Q8TAF3 677 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 NCSTNQ92542 709 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 PMEPA1Q969W9 287 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 CXorf40BQ96DE9 158 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 RNF31Q96EP0 1072 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 MFSD3Q96ES6 412 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 CRELD1Q96HD1 420 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 AHCYL2Q96HN2 611 aaKnown RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 RMDN2Q96LZ7 410 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 RANBP9Q96S59 729 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 INSM2Q96T92 566 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 NAP1L3Q99457 506 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 NAPGQ99747 312 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 POLR1BQ9H9Y6 1135 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 SARS2Q9NP81 518 aaKnown RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 ASCL3Q9NQ33 180 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 IMP3Q9NV31 184 aaKnown RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 IL1RAPL1Q9NZN1 696 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 OGFRQ9NZT2 677 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 PISDQ9UG56 409 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 RALYQ9UKM9 306 aaKnown RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 LOXL2Q9Y4K0 774 aa7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 MAP1BP46821 2468 aaKnown RBP7.52□□□□□ -1.21
HMGB3P1-201ENST00000393368 KMT2BQ9UMN6 2715 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 IGLV3-16A0A075B6K0 115 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 CCDC187A0A096LP49 1063 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 GOLGA6L10A0A0M3HER8 536 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 CTAGE9A4FU28 777 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms