RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 RPS12P25398 132 aaKnown RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 NR2C2P49116 596 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 ALDH3A2P51648 485 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 ARSFP54793 590 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 TEKQ02763 1124 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 KCNJ11Q14654 390 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 DUSP6Q16828 381 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 LRRC26Q2I0M4 334 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 TEX44Q53QW1 395 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 PAN3Q58A45 887 aaKnown RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 YIF1BQ5BJH7 314 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 TXNDC11Q6PKC3 985 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 GLRX5Q86SX6 157 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 FAM71AQ8IYT1 594 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 VWA5B2Q8N398 1253 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 NANPQ8TBE9 248 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 PI4K2AQ9BTU6 479 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 NIPAL2Q9H841 368 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 RNF121Q9H920 327 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 CNTN3Q9P232 1028 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 ZNF624Q9P2J8 865 aaPredicted RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 AFF4Q9UHB7 1163 aaKnown RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 RNF6Q9Y252 685 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 PCDHGB3Q9Y5G1 929 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 CLCA3PQ9Y6N3 262 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 GON4LQ3T8J9 2241 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 hCG_1818297A0A087WSY0 165 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 WDR27A2RRH5 827 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 LEUTXA8MZ59 168 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CHURC1-FNTBB4DL54 471 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 K7ERI5 159 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ATP6AP2O75787 350 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 SUPT7LO94864 414 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 SNX4O95219 450 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CSH1P0DML2 217 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CSH2P0DML3 217 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ARP10275 920 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 MTHFD1P11586 935 aaKnown RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ZNF250P15622 560 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 NCK1P16333 377 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 HSD17B2P37059 387 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 BRCC3P46736 316 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 RPS5P46782 204 aaKnown RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ACLYP53396 1101 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 NOMO3P69849 1222 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 DGKZQ13574 1117 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 NOMO1Q15155 1222 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 TIGD6Q17RP2 521 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 PIK3R6Q5UE93 754 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 METTL11BQ5VVY1 283 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 DRICH1Q6PGQ1 229 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 MIER2Q8N344 545 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 OR6C4Q8NGE1 309 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 SETD6Q8TBK2 473 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 FAM45AQ8TCE6 357 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 TRPM4Q8TD43 1214 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ZDHHC12Q96GR4 267 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 TTLL2Q9BWV7 592 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ITPAQ9BY32 194 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 TNKS2Q9H2K2 1166 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 IL1RAPQ9NPH3 570 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 SLCO3A1Q9UIG8 710 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 MGAT4AQ9UM21 535 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 SYNJ2BP-COX16A0A087WUM0 186 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CIB4A0PJX0 185 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ZNF879B4DU55 563 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 F8VP50 259 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 AKR7A2O43488 359 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 RFPL1O75677 317 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 OAZ2O95190 189 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 RASGRP1O95267 797 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CHRNGP07510 517 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 BMP1P13497 986 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 AVPR1AP37288 418 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CSKP41240 450 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ERVK-25P63136 954 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 IFITM3Q01628 133 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 PTP4A2Q12974 167 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 AQP6Q13520 282 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 MED22Q15528 200 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 GRK1Q15835 563 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 LIPMQ5VYY2 423 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 GALNT5Q7Z7M9 940 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 OR7G3Q8NG95 312 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 BLOC1S5Q8TDH9 187 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 LRRC15Q8TF66 581 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 BSNDQ8WZ55 320 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 TANKQ92844 425 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 FBXL18Q96ME1 805 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 EBNA1BP2Q99848 306 aaKnown RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ERVK-6Q9BXR3 956 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ACOXLQ9NUZ1 547 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ERVK-18Q9QC07 812 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 DIMT1Q9UNQ2 313 aaKnown RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 AHDC1Q5TGY3 1603 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ASTN1O14525 1302 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 PRORSD1PA6NEY8 169 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 FAM86B1E9PN63 330 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CPNE6O95741 557 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 TGM6O95932 706 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms