RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ZW10O43264 779 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 STBD1O95210 358 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 DARSP14868 501 aaKnown RBP14.1□□□□□ -0.15
RTF1-201ENST00000389629 ITGALP20701 1170 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 GTF2E2P29084 291 aaKnown RBP14.1□□□□□ -0.15
RTF1-201ENST00000389629 ALDH3A2P51648 485 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 DIO3P55073 304 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 COX10Q12887 443 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 PRAMEF19Q5SWL8 479 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 CRYBG2Q8N1P7 616 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 TCAIMQ8N3R3 496 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 COL22A1Q8NFW1 1626 aaPredicted RBP14.1□□□□□ -0.15
RTF1-201ENST00000389629 ARNTL2Q8WYA1 636 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 FUNDC2Q9BWH2 189 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 CRISPLD1Q9H336 500 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 ABHD16BQ9H3Z7 469 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 TBC1D14Q9P2M4 693 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 SESN1Q9Y6P5 492 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 PDE4DIPQ5VU43 2346 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 TCRBV5S1A1TA0A578 114 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 TTC24A2A3L6 582 aaPredicted RBP14.1□□□□□ -0.15
RTF1-201ENST00000389629 CXCR6O00574 342 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 AREL1O15033 823 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 CDH1P12830 882 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 CTSKP43235 329 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 UFM1P61960 85 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 HERVK_113P63132 956 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 CYP4F8P98187 520 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 MZT2BQ6NZ67 158 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 BORAQ6PGQ7 559 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 MAVSQ7Z434 540 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 CDK15Q96Q40 435 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 FCRL5Q96RD9 977 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 NPLQ9BXD5 320 aaPredicted RBP14.1□□□□□ -0.15
RTF1-201ENST00000389629 ERVK-6Q9BXR3 956 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 ATP6V1HQ9UI12 483 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 GIT1Q9Y2X7 761 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 HLA-DQB2P05538 268 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 HLCSP50747 726 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 TPRG1LQ5T0D9 272 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 TRNP1Q6NT89 227 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 LRRC49Q8IUZ0 686 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 ZDHHC21Q8IVQ6 265 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 SLC34A3Q8N130 599 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 OR8H1Q8NGG4 311 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 OTUB1Q96FW1 271 aaPredicted RBP14.1□□□□□ -0.15
RTF1-201ENST00000389629 SLC25A51Q9H1U9 297 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 NEK6Q9HC98 313 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 EIF2B4Q9UI10 523 aaKnown RBP14.1□□□□□ -0.15
RTF1-201ENST00000389629 LOC100130705A0A1B0GUX0 176 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 FAM220BPB1ANY3 271 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 GPR182O15218 404 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 SCNN1AP37088 669 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 RHOAP61586 193 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 ELP6Q0PNE2 266 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 FAM174BQ3ZCQ3 159 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 CTXN3Q4LDR2 81 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 BRMS1LQ5PSV4 323 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 C16orf62Q7Z3J2 963 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 HDDC2Q7Z4H3 204 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 SLC15A3Q8IY34 581 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 WDR36Q8NI36 951 aaKnown RBP14.1□□□□□ -0.15
RTF1-201ENST00000389629 TRIM45Q9H8W5 580 aaPredicted RBP14.1□□□□□ -0.15
RTF1-201ENST00000389629 ARL15Q9NXU5 204 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 MARCH2Q9P0N8 246 aa14.1□□□□□ -0.15
RTF1-201ENST00000389629 UBA2Q9UBT2 640 aaPredicted RBP14.1□□□□□ -0.15
RTF1-201ENST00000389629 CNOT11Q9UKZ1 510 aaKnown RBP14.1□□□□□ -0.15
RTF1-201ENST00000389629 ZNF487B1APH4 448 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 IFRD1O00458 451 aaPredicted RBP14.09□□□□□ -0.15
RTF1-201ENST00000389629 PSIP1O75475 530 aaKnown RBP14.09□□□□□ -0.15
RTF1-201ENST00000389629 GOT2P00505 430 aaKnown RBP14.09□□□□□ -0.15
RTF1-201ENST00000389629 MAP2K4P45985 399 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 TXNL4AP83876 142 aaKnown RBP14.09□□□□□ -0.15
RTF1-201ENST00000389629 TUBA3CQ13748 450 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 KLHL12Q53G59 568 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 ZNF597Q96LX8 424 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 NPY6RQ99463 290 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 CORO1BQ9BR76 489 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 PCDHGA7Q9Y5G6 932 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 PEX16Q9Y5Y5 336 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 FAM240BA0A1B0GVZ2 78 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 E9PAM4 449 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 PLOD2O00469 737 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 CPNE3O75131 537 aaKnown RBP14.09□□□□□ -0.15
RTF1-201ENST00000389629 ZNF7P17097 686 aaPredicted RBP14.09□□□□□ -0.15
RTF1-201ENST00000389629 MYL12AP19105 171 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 NR4A2P43354 598 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 PSEN2P49810 448 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 CD83Q01151 205 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 TXNDC11Q6PKC3 985 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 PLEKHH3Q7Z736 793 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 C11orf96Q7Z7L8 435 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 GALNT12Q8IXK2 581 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 SCML4Q8N228 414 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 OR4K2Q8NGD2 314 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 PPTC7Q8NI37 304 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 NTAN1Q96AB6 310 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 KIFC1Q9BW19 673 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 LHPPQ9H008 270 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 ADAMTS10Q9H324 1103 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms