RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 GNASQ5JWF2 1037 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 LCN8Q6JVE9 175 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 SPRED1Q7Z699 444 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 MILR1Q7Z6M3 343 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 ARMC8Q8IUR7 673 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 PDPRQ8NCN5 879 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 MYOCQ99972 504 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 RHNO1Q9BSD3 238 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 TKTL2Q9H0I9 626 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 WDCPQ9H6R7 721 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 NEK6Q9HC98 313 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 ANKMY1Q9P2S6 941 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 PCDHGA11Q9Y5H2 935 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 PTPRDP23468 1912 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 ANKRD34BA5PLL1 514 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 CASTOR2A6NHX0 329 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 RPL9P32969 192 aaKnown RBP13.7□□□□□ -0.22
SDC1-202ENST00000381150 DGKQP52824 942 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 EPS8Q12929 822 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 SKIV2LQ15477 1246 aaKnown RBP13.7□□□□□ -0.22
SDC1-202ENST00000381150 RBBP7Q16576 425 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 ADPRMQ3LIE5 342 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 ATP6AP1LQ52LC2 224 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 FAM98BQ52LJ0 330 aaKnown RBP13.7□□□□□ -0.22
SDC1-202ENST00000381150 HECTD2Q5U5R9 776 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 FAM86B1Q8N7N1 296 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 ZHX1-C8orf76Q96EF9 292 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 TUBA1CQ9BQE3 449 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 TRIT1Q9H3H1 467 aaKnown RBP13.7□□□□□ -0.22
SDC1-202ENST00000381150 IGSF5Q9NSI5 407 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 GIMAP4Q9NUV9 329 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 RBM22Q9NW64 420 aaKnown RBP eCLIP13.7□□□□□ -0.22
SDC1-202ENST00000381150 ERVK-18Q9QC07 812 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 SHROOM3Q8TF72 1996 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 A0A1B0GTL3 188 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 MANSC4A6NHS7 340 aaPredicted RBP13.7□□□□□ -0.22
SDC1-202ENST00000381150 PRMT9Q6P2P2 845 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 ATPAF2Q8N5M1 289 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 SOCS4Q8WXH5 440 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 TEKT5Q96M29 485 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 GSTO2Q9H4Y5 243 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 TMLHEQ9NVH6 421 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.7□□□□□ -0.22
SDC1-202ENST00000381150 MOSPD1Q9UJG1 213 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 ORC6Q9Y5N6 252 aa13.7□□□□□ -0.22
SDC1-202ENST00000381150 A0A087X1B8 175 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 ZNF99A8MXY4 864 aaPredicted RBP13.69□□□□□ -0.22
SDC1-202ENST00000381150 PGLSO95336 258 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 CTSHP09668 335 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 CYBAP13498 195 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 LEPRP48357 1165 aaKnown RBP13.69□□□□□ -0.22
SDC1-202ENST00000381150 ALDH3A2P51648 485 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 GRSF1Q12849 480 aaKnown RBP eCLIP13.69□□□□□ -0.22
SDC1-202ENST00000381150 BCL2A1Q16548 175 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 AAK1Q2M2I8 961 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 CTU2Q2VPK5 515 aaKnown RBP13.69□□□□□ -0.22
SDC1-202ENST00000381150 SMUG1Q53HV7 270 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 USP43Q70EL4 1123 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 P2RY8Q86VZ1 359 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 PNPT1Q8TCS8 783 aaKnown RBP13.69□□□□□ -0.22
SDC1-202ENST00000381150 S100ZQ8WXG8 99 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.69□□□□□ -0.224e-6■■■■□ 19.6
SDC1-202ENST00000381150 FAM162AQ96A26 154 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 CCDC126Q96EE4 140 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 CDK15Q96Q40 435 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 HGH1Q9BTY7 390 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 BBS2Q9BXC9 721 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 GPN2Q9H9Y4 310 aaPredicted RBP13.69□□□□□ -0.22
SDC1-202ENST00000381150 SARS2Q9NP81 518 aaKnown RBP13.69□□□□□ -0.22
SDC1-202ENST00000381150 RGS18Q9NS28 235 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 POLG2Q9UHN1 485 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 NEU3Q9UQ49 428 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 VWA7Q9Y334 891 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 CCRL2O00421 344 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 ZNF623O75123 536 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 CDK14O94921 469 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 C1RP00736 705 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 ADARB1P78563 741 aaKnown RBP13.69□□□□□ -0.22
SDC1-202ENST00000381150 INTS6LQ5JSJ4 861 aaKnown RBP13.69□□□□□ -0.22
SDC1-202ENST00000381150 AGAP7PQ5VUJ5 663 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 TTC23Q5W5X9 447 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 PPP2R2DQ66LE6 453 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 TXNDC11Q6PKC3 985 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 LRRTM3Q86VH5 581 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 DCP1BQ8IZD4 617 aaKnown RBP13.69□□□□□ -0.22
SDC1-202ENST00000381150 DEPDC4Q8N2C3 294 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 TMEM125Q96AQ2 219 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 SMARCD1Q96GM5 515 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 CITED4Q96RK1 184 aa13.69□□□□□ -0.22
SDC1-202ENST00000381150 TDRD15B5MCY1 1934 aaKnown RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 M0QZ92 97 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 TFECO14948 347 aaPredicted RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 NCAM2O15394 837 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 CPNE6O95741 557 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 ANGPTL1O95841 491 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 PSMD8P48556 350 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 ZNF157P51786 506 aaPredicted RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 RACK1P63244 317 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms