RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 OR4K2Q8NGD2 314 aa17.53■□□□□ 0.4
COMMD6-202ENST00000377612 OR13C4Q8NGS5 318 aa17.53■□□□□ 0.4
COMMD6-202ENST00000377612 CALR3Q96L12 384 aaKnown RBP17.53■□□□□ 0.4
COMMD6-202ENST00000377612 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.53■□□□□ 0.4
COMMD6-202ENST00000377612 SLC40A1Q9NP59 571 aa17.53■□□□□ 0.4
COMMD6-202ENST00000377612 WASH6PQ9NQA3 447 aa17.53■□□□□ 0.4
COMMD6-202ENST00000377612 CCDC88CQ9P219 2028 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 CCL22O00626 93 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 STX7O15400 261 aaKnown RBP17.52■□□□□ 0.4
COMMD6-202ENST00000377612 UBXN7O94888 489 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 VIPP01282 170 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 ANKRD34CP0C6C1 535 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 PLA2G2AP14555 144 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 LIFP15018 202 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 PBLDP30039 288 aaPredicted RBP17.52■□□□□ 0.4
COMMD6-202ENST00000377612 CAPZBP47756 277 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 GDF10P55107 478 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 TAF1AQ15573 450 aaPredicted RBP17.52■□□□□ 0.4
COMMD6-202ENST00000377612 LDLRAP1Q5SW96 308 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 ZDHHC20Q5W0Z9 365 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 DUS1LQ6P1R4 473 aaKnown RBP17.52■□□□□ 0.4
COMMD6-202ENST00000377612 DET1Q7L5Y6 550 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 TIPARPQ7Z3E1 657 aaKnown RBP17.52■□□□□ 0.4
COMMD6-202ENST00000377612 TRIM48Q8IWZ4 208 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 AVL9Q8NBF6 648 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 CCDC112Q8NEF3 446 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 EXTL1Q92935 676 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 C9orf72Q96LT7 481 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 EPB41L1Q9H4G0 881 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 PILRAQ9UKJ1 303 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 PKP3Q9Y446 797 aa17.52■□□□□ 0.4
COMMD6-202ENST00000377612 KIF1CO43896 1103 aaKnown RBP17.51■□□□□ 0.39
COMMD6-202ENST00000377612 RAD1O60671 282 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 POP7O75817 140 aaKnown RBP17.51■□□□□ 0.39
COMMD6-202ENST00000377612 METTL18O95568 372 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 LPOP22079 712 aaPredicted RBP17.51■□□□□ 0.39
COMMD6-202ENST00000377612 IDSP22304 550 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 TNNT3P45378 269 aaPredicted RBP17.51■□□□□ 0.39
COMMD6-202ENST00000377612 RAB15P59190 212 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 ITGA9Q13797 1035 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 DCAF12Q5T6F0 453 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 KCTD11Q693B1 232 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 TMEM220Q6QAJ8 160 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 SPC24Q8NBT2 197 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 BRSK1Q8TDC3 778 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 TGM7Q96PF1 710 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 TBL1YQ9BQ87 522 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 SLC12A9Q9BXP2 914 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 PSMD13Q9UNM6 376 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 PCDHB11Q9Y5F2 797 aa17.51■□□□□ 0.39
COMMD6-202ENST00000377612 CAPN5O15484 640 aaPredicted RBP17.5■□□□□ 0.39
COMMD6-202ENST00000377612 PPFIA2O75334 1257 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 SRP72O76094 671 aaKnown RBP17.5■□□□□ 0.39
COMMD6-202ENST00000377612 TJP3O95049 919 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 DLGAP3O95886 979 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 AKT1P31749 480 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 SH3BP2P78314 561 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 RPE65Q16518 533 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 FNBP1LQ5T0N5 605 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 PEX26Q7Z412 305 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 AMZ2Q86W34 360 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 CACNA2D3Q8IZS8 1091 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 LILRA3Q8N6C8 439 aaPredicted RBP17.5■□□□□ 0.39
COMMD6-202ENST00000377612 SLC35B2Q8TB61 432 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 ZNF398Q8TD17 642 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 CXorf40BQ96DE9 158 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 MED8Q96G25 268 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 ZCCHC2Q9C0B9 1178 aaKnown RBP17.5■□□□□ 0.39
COMMD6-202ENST00000377612 ZNF768Q9H5H4 540 aaKnown RBP17.5■□□□□ 0.39
COMMD6-202ENST00000377612 FBXO8Q9NRD0 319 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.5■□□□□ 0.39
COMMD6-202ENST00000377612 AMFRQ9UKV5 643 aa17.5■□□□□ 0.39
COMMD6-202ENST00000377612 CFAP20Q9Y6A4 193 aaKnown RBP17.5■□□□□ 0.39
COMMD6-202ENST00000377612 AGAP14A8MT82 685 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 LDB2O43679 373 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 PRSS56P0CW18 603 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 ZNF28P17035 718 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 CDC25BP30305 580 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 ATP1A2P50993 1020 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 TMPRSS15P98073 1019 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 PLXDC1Q8IUK5 500 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 HES6Q96HZ4 224 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 DNAJC1Q96KC8 554 aaKnown RBP17.49■□□□□ 0.39
COMMD6-202ENST00000377612 RMDN2Q96LZ7 410 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 TTC25Q96NG3 672 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 TEFMQ96QE5 360 aaKnown RBP17.49■□□□□ 0.39
COMMD6-202ENST00000377612 ASPSCR1Q9BZE9 553 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 FAM96AQ9H5X1 160 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 ASB8Q9H765 288 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 ARNT2Q9HBZ2 717 aa17.49■□□□□ 0.39
COMMD6-202ENST00000377612 AAR2Q9Y312 384 aaKnown RBP17.49■□□□□ 0.39
COMMD6-202ENST00000377612 TMEM184BQ9Y519 407 aaPredicted RBP17.49■□□□□ 0.39
COMMD6-202ENST00000377612 TNRC6AQ8NDV7 1962 aaKnown RBP17.49■□□□□ 0.39
COMMD6-202ENST00000377612 SPTA1P02549 2419 aa17.48■□□□□ 0.39
COMMD6-202ENST00000377612 LOC101059948A0A1B0GTJ6 334 aa17.48■□□□□ 0.39
COMMD6-202ENST00000377612 C5orf60A6NFR6 353 aa17.48■□□□□ 0.39
COMMD6-202ENST00000377612 STK17BO94768 372 aa17.48■□□□□ 0.39
COMMD6-202ENST00000377612 FAM87AP0C7U9 286 aa17.48■□□□□ 0.39
COMMD6-202ENST00000377612 VCLP18206 1134 aa17.48■□□□□ 0.39
COMMD6-202ENST00000377612 SEPHS1P49903 392 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms