RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 ZNF567Q8N184 647 aa15.36■□□□□ 0.05
FXN-201ENST00000377270 ZNF565Q8N9K5 539 aa15.36■□□□□ 0.05
FXN-201ENST00000377270 PCED1BQ96HM7 432 aa15.36■□□□□ 0.05
FXN-201ENST00000377270 GDF15Q99988 308 aa15.36■□□□□ 0.05
FXN-201ENST00000377270 TCAF1Q9Y4C2 921 aa15.36■□□□□ 0.05
FXN-201ENST00000377270 SNX13Q9Y5W8 968 aa15.36■□□□□ 0.05
FXN-201ENST00000377270 AKAP10O43572 662 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 LHX1P48742 406 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 SEPHS1P49903 392 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 DAOAP59103 153 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 PAFAH1B3Q15102 231 aaKnown RBP15.35■□□□□ 0.05
FXN-201ENST00000377270 VARS2Q5ST30 1063 aaKnown RBP15.35■□□□□ 0.05
FXN-201ENST00000377270 PID1Q7Z2X4 250 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 FAM35AQ86V20 835 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 FAM124AQ86V42 546 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 ZNF781Q8N8C0 355 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 MAPK15Q8TD08 544 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 TBC1D20Q96BZ9 403 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 TUBA1CQ9BQE3 449 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 SLC17A6Q9P2U8 582 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 COPG2Q9UBF2 871 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 MAPRE3Q9UPY8 281 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 PCDHB12Q9Y5F1 795 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 RAD54BQ9Y620 910 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 ISPDA4D126 451 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 KCNK1O00180 336 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 GOT2P00505 430 aaKnown RBP15.35■□□□□ 0.05
FXN-201ENST00000377270 ERCC2P18074 760 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 MAGP20916 626 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 ZNF157P51786 506 aaPredicted RBP15.35■□□□□ 0.05
FXN-201ENST00000377270 MAPK12P53778 367 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 IFRD2Q12894 506 aaPredicted RBP15.35■□□□□ 0.05
FXN-201ENST00000377270 AQP6Q13520 282 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 CXCL17Q6UXB2 119 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 KIAA1324Q6UXG2 1013 aaKnown RBP15.35■□□□□ 0.05
FXN-201ENST00000377270 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.35■□□□□ 0.05
FXN-201ENST00000377270 ZBTB49Q6ZSB9 765 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 CHST15Q7LFX5 561 aaPredicted RBP15.35■□□□□ 0.05
FXN-201ENST00000377270 SLCO6A1Q86UG4 719 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 LACC1Q8IV20 430 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 C3orf58Q8NDZ4 430 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 ZMIZ2Q8NF64 920 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 ASB9Q96DX5 294 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 B3GALT6Q96L58 329 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 MRM3Q9HC36 420 aaKnown RBP15.35■□□□□ 0.05
FXN-201ENST00000377270 TMEM30AQ9NV96 361 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 POLR3BQ9NW08 1133 aaPredicted RBP15.35■□□□□ 0.05
FXN-201ENST00000377270 TRPV2Q9Y5S1 764 aa15.35■□□□□ 0.05
FXN-201ENST00000377270 CASTOR2A6NHX0 329 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 TRIM38O00635 465 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 DCLK1O15075 740 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 CPNE3O75131 537 aaKnown RBP15.34■□□□□ 0.05
FXN-201ENST00000377270 ALDOAP04075 364 aaKnown RBP15.34■□□□□ 0.05
FXN-201ENST00000377270 PGRP06401 933 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 EEF1B2P24534 225 aaKnown RBP15.34■□□□□ 0.05
FXN-201ENST00000377270 SMAD1Q15797 465 aaKnown RBP15.34■□□□□ 0.05
FXN-201ENST00000377270 SGCAQ16586 387 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 C21orf62-AS1Q17RA5 79 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 STEAP4Q687X5 459 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 ZNF544Q6NX49 715 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 CYS1Q717R9 158 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 PTAR1Q7Z6K3 402 aaPredicted RBP15.34■□□□□ 0.05
FXN-201ENST00000377270 AMIGO1Q86WK6 493 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 LYSMD2Q8IV50 215 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 MICU2Q8IYU8 434 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 TMEM86AQ8N2M4 240 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 FAM156AQ8NDB6 213 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 ARNTL2Q8WYA1 636 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 AKAP1Q92667 903 aaKnown RBP eCLIP15.34■□□□□ 0.05
FXN-201ENST00000377270 SCYL1Q96KG9 808 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 APBA2Q99767 749 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 EFCAB1Q9HAE3 211 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 EIF2B3Q9NR50 452 aaKnown RBP15.34■□□□□ 0.05
FXN-201ENST00000377270 ZNF638Q14966 1978 aaKnown RBP15.34■□□□□ 0.05
FXN-201ENST00000377270 ARL5CA6NH57 179 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 I6L893 689 aaPredicted RBP15.34■□□□□ 0.05
FXN-201ENST00000377270 SLC22A2O15244 555 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 NPPAP01160 153 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 AMHP03971 560 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 PRKCGP05129 697 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 AKR1A1P14550 325 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 IMPDH1P20839 514 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 SCNN1GP51170 649 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 RHDQ02161 417 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 TNK2Q07912 1038 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 GRM7Q14831 915 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 GRTP1Q5TC63 336 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 C17orf99Q6UX52 265 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 SPATC1Q76KD6 591 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 CELF2-AS1Q8N7Q2 184 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 ST13P5Q8NFI4 369 aaPredicted RBP15.34■□□□□ 0.05
FXN-201ENST00000377270 ST6GAL2Q96JF0 529 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 SLC9A7Q96T83 725 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 PAAF1Q9BRP4 392 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 PRDM8Q9NQV8 689 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 DDIT4Q9NX09 232 aa15.34■□□□□ 0.05
FXN-201ENST00000377270 OR6C65A6NJZ3 312 aa15.33■□□□□ 0.05
FXN-201ENST00000377270 TPP1O14773 563 aa15.33■□□□□ 0.05
FXN-201ENST00000377270 VAPBO95292 243 aa15.33■□□□□ 0.05
FXN-201ENST00000377270 HSPA4LO95757 839 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms