RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CAPZBP47756 277 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 ATP5OP48047 213 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 POLE2P56282 527 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 KCNC4Q03721 635 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 XRCC4Q13426 336 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 ATG14Q6ZNE5 492 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 ESX1Q8N693 406 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 RASGEF1AQ8N9B8 481 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 ZDHHC12Q96GR4 267 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 ULBP3Q9BZM4 244 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 ZNF768Q9H5H4 540 aaKnown RBP20.65■□□□□ 0.9
VSX1-201ENST00000376707 WDR37Q9Y2I8 494 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 DUSP10Q9Y6W6 482 aa20.65■□□□□ 0.9
VSX1-201ENST00000376707 GPR39O43194 453 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 POP7O75817 140 aaKnown RBP20.64■□□□□ 0.89
VSX1-201ENST00000376707 PTPN7P35236 360 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 KCNAB2Q13303 367 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 GPRC6AQ5T6X5 926 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 CACHD1Q5VU97 1274 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 IRGCQ6NXR0 463 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 TMEM220Q6QAJ8 160 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 RAD9BQ6WBX8 426 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 DDHD1Q8NEL9 900 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 OR6C1Q96RD1 312 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 FERMT1Q9BQL6 677 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 TRIM4Q9C037 500 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 GBA3Q9H227 469 aa20.64■□□□□ 0.89
VSX1-201ENST00000376707 MACROD2A1Z1Q3 448 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 OR2AG2A6NM03 316 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 STX7O15400 261 aaKnown RBP20.63■□□□□ 0.89
VSX1-201ENST00000376707 PJA2O43164 708 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 SUV39H1O43463 412 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 KIF1CO43896 1103 aaKnown RBP20.63■□□□□ 0.89
VSX1-201ENST00000376707 ANXA9O76027 345 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 AGTP01019 485 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 RBL1P28749 1068 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 AKT1P31749 480 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 STAT5AP42229 794 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 CTSCP53634 463 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 GEMP55040 296 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 SH3BP2P78314 561 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 MC1RQ01726 317 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 DMPKQ09013 629 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 CDC20Q12834 499 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 MAP7Q14244 749 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 IL11RAQ14626 422 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 ITPRIPL1Q6GPH6 555 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 FAM92BQ6ZTR7 304 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 PRSS42Q7Z5A4 293 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 GAS2L3Q86XJ1 694 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 RASGRP3Q8IV61 690 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 STARD8Q92502 1023 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 FICDQ9BVA6 458 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 LACRTQ9GZZ8 138 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 C10orf88Q9H8K7 445 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 IL17BQ9UHF5 180 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 PSMD13Q9UNM6 376 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 DNMT3AQ9Y6K1 912 aaPredicted RBP20.63■□□□□ 0.89
VSX1-201ENST00000376707 RPS6KL1Q9Y6S9 549 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 TENM4Q6N022 2769 aa20.63■□□□□ 0.89
VSX1-201ENST00000376707 CCDC66A2RUB6 948 aa20.62■□□□□ 0.89
VSX1-201ENST00000376707 MSH3P20585 1137 aa20.62■□□□□ 0.89
VSX1-201ENST00000376707 CTNNA2P26232 953 aa20.62■□□□□ 0.89
VSX1-201ENST00000376707 LONRF2Q1L5Z9 754 aa20.62■□□□□ 0.89
VSX1-201ENST00000376707 C6orf15Q6UXA7 325 aaPredicted RBP20.62■□□□□ 0.89
VSX1-201ENST00000376707 LRRC57Q8N9N7 239 aa20.62■□□□□ 0.89
VSX1-201ENST00000376707 ZNF398Q8TD17 642 aa20.62■□□□□ 0.89
VSX1-201ENST00000376707 RNF31Q96EP0 1072 aa20.62■□□□□ 0.89
VSX1-201ENST00000376707 ELMO2Q96JJ3 720 aa20.62■□□□□ 0.89
VSX1-201ENST00000376707 ZNF514Q96K75 400 aaPredicted RBP20.62■□□□□ 0.89
VSX1-201ENST00000376707 SMOXQ9NWM0 555 aa20.62■□□□□ 0.89
VSX1-201ENST00000376707 EPHA6Q9UF33 1036 aa20.62■□□□□ 0.89
VSX1-201ENST00000376707 TUBD1Q9UJT1 453 aa20.62■□□□□ 0.89
VSX1-201ENST00000376707 C2orf81A6NN90 581 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 GAPDHSO14556 408 aaPredicted RBP20.61■□□□□ 0.89
VSX1-201ENST00000376707 PRAMEF1O95521 474 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 ZNF28P17035 718 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 TCN2P20062 427 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 PBLDP30039 288 aaPredicted RBP20.61■□□□□ 0.89
VSX1-201ENST00000376707 CA5AP35218 305 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 CSRP3P50461 194 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 VAV2P52735 878 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 NFE2L1Q14494 772 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 PTPRCAPQ14761 206 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 PLCL1Q15111 1095 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 RPE65Q16518 533 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 FNBP1LQ5T0N5 605 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 C16orf46Q6P387 395 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 CYB5D1Q6P9G0 228 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 KLHL35Q6PF15 583 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 FAM83HQ6ZRV2 1179 aaPredicted RBP20.61■□□□□ 0.89
VSX1-201ENST00000376707 CDKL3Q8IVW4 592 aaPredicted RBP20.61■□□□□ 0.89
VSX1-201ENST00000376707 GPR150Q8NGU9 434 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 KLHL6Q8WZ60 621 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 STAMBPL1Q96FJ0 436 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 OSBPL8Q9BZF1 889 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 RAB33BQ9H082 229 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 ARL5AQ9Y689 179 aa20.61■□□□□ 0.89
VSX1-201ENST00000376707 TERTO14746 1132 aaKnown RBP20.6■□□□□ 0.89
VSX1-201ENST00000376707 STK10O94804 968 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms