RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 TUBB1Q9H4B7 451 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 MAGEE1Q9HCI5 957 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 SARS2Q9NP81 518 aaKnown RBP13.82□□□□□ -0.2
MSH5-202ENST00000375740 CACNA2D2Q9NY47 1150 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 SPATA7Q9P0W8 599 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 EVLQ9UI08 416 aaPredicted RBP13.82□□□□□ -0.2
MSH5-202ENST00000375740 CLEC4EQ9ULY5 219 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 PADI4Q9UM07 663 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 E7ENX8 843 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 K7EPI3 171 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 CBFA2T3O75081 653 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 ATE1O95260 518 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 PGLSO95336 258 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 CD247P20963 164 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 GKP32189 559 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 PTGER3P43115 390 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 AGTR2P50052 363 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 LCP2Q13094 533 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 GRB7Q14451 532 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 PDCD4Q53EL6 469 aaKnown RBP13.81□□□□□ -0.2
MSH5-202ENST00000375740 DCDC5Q6ZRR9 648 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 FAM217AQ8IXS0 508 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 CMTR2Q8IYT2 770 aaKnown RBP13.81□□□□□ -0.2
MSH5-202ENST00000375740 ATP6V1E2Q96A05 226 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 LINGO1Q96FE5 620 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 MYO19Q96H55 970 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 SLC30A1Q9Y6M5 507 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 E5RI56 91 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 H3BNH8 94 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 LILRB3O75022 631 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 LINC00032P0C843 101 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 GSTT2P0CG29 244 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 GSTT2BP0CG30 244 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 CD9P21926 228 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 GPX3P22352 226 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 ITGB8P26012 769 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 HMGCLP35914 325 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 ATP4BP51164 291 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 HK3P52790 923 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 NME5P56597 212 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 AP1S1P61966 158 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 ECT2LQ008S8 904 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 CACNG1Q06432 222 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 AARS2Q5JTZ9 985 aaKnown RBP13.81□□□□□ -0.2
MSH5-202ENST00000375740 RETSATQ6NUM9 610 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 FUNDC1Q8IVP5 155 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 BBS7Q8IWZ6 715 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 ESAMQ96AP7 390 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 EME1Q96AY2 570 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 ISOC1Q96CN7 298 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 P2RY12Q9H244 342 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 CFAP97Q9P2B7 532 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 LSM7Q9UK45 103 aaKnown RBP13.81□□□□□ -0.2
MSH5-202ENST00000375740 BTRCQ9Y297 605 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 CROCCQ5TZA2 2017 aa13.81□□□□□ -0.2
MSH5-202ENST00000375740 TRIM38O00635 465 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 ACOT8O14734 319 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 TGM5O43548 720 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 KLK8O60259 260 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 NRP2O60462 931 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 BCAS2O75934 225 aaPredicted RBP13.8□□□□□ -0.2
MSH5-202ENST00000375740 CKMP06732 381 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 RPS17P08708 135 aaKnown RBP13.8□□□□□ -0.2
MSH5-202ENST00000375740 CNPP09543 421 aaKnown RBP13.8□□□□□ -0.2
MSH5-202ENST00000375740 CSF2RAP15509 400 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 GJA1P17302 382 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 RFC2P35250 354 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 WDR5P61964 334 aaKnown RBP13.8□□□□□ -0.2
MSH5-202ENST00000375740 ATP1A4Q13733 1029 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 LAYNQ6UX15 382 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 TPGS1Q6ZTW0 290 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 MRPS31Q92665 395 aaKnown RBP13.8□□□□□ -0.2
MSH5-202ENST00000375740 KCNJ9Q92806 393 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 TMEM79Q9BSE2 394 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 SLC25A23Q9BV35 468 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 C2orf49Q9BVC5 232 aaPredicted RBP13.8□□□□□ -0.2
MSH5-202ENST00000375740 KIAA1522Q9P206 1035 aaPredicted RBP13.8□□□□□ -0.2
MSH5-202ENST00000375740 BCAP29Q9UHQ4 241 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 TIMM22Q9Y584 194 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 NRG2O14511 850 aaPredicted RBP13.8□□□□□ -0.2
MSH5-202ENST00000375740 STX16O14662 325 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 MRASO14807 208 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 ESR1P03372 595 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 CLTBP09497 229 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 OCM2P0CE71 109 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 OCMP0CE72 109 aaPredicted RBP13.8□□□□□ -0.2
MSH5-202ENST00000375740 ACADVLP49748 655 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 STX1BP61266 288 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 KIF19Q2TAC6 998 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 CCDC92Q53HC0 331 aaPredicted RBP13.8□□□□□ -0.2
MSH5-202ENST00000375740 C1orf53Q5VUE5 145 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 HTR3DQ70Z44 454 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 GPSM1Q86YR5 675 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 PHYKPLQ8IUZ5 450 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 CENPSQ8N2Z9 138 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 HAUS8Q9BT25 410 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 TRNAU1APQ9NX07 287 aaKnown RBP13.8□□□□□ -0.2
MSH5-202ENST00000375740 SARDHQ9UL12 918 aa13.8□□□□□ -0.2
MSH5-202ENST00000375740 J3QRK9 145 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 ZBTB11O95625 1053 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms