RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ST14Q9Y5Y6 855 aa12.01□□□□□ -0.49
LSM2-208ENST00000375661 A0A0U1RQS6 177 aa12□□□□□ -0.49
LSM2-208ENST00000375661 LOC101059948A0A1B0GTJ6 334 aa12□□□□□ -0.49
LSM2-208ENST00000375661 CCDC188H7C350 402 aa12□□□□□ -0.49
LSM2-208ENST00000375661 ANXA9O76027 345 aa12□□□□□ -0.49
LSM2-208ENST00000375661 NDST3O95803 873 aa12□□□□□ -0.49
LSM2-208ENST00000375661 AGTP01019 485 aa12□□□□□ -0.49
LSM2-208ENST00000375661 EPOP01588 193 aa12□□□□□ -0.49
LSM2-208ENST00000375661 KRT14P02533 472 aa12□□□□□ -0.49
LSM2-208ENST00000375661 LHCGRP22888 699 aa12□□□□□ -0.49
LSM2-208ENST00000375661 ETV3P41162 512 aa12□□□□□ -0.49
LSM2-208ENST00000375661 CHRNA4P43681 627 aa12□□□□□ -0.49
LSM2-208ENST00000375661 SPARCL1Q14515 664 aa12□□□□□ -0.49
LSM2-208ENST00000375661 RANBP10Q6VN20 620 aa12□□□□□ -0.49
LSM2-208ENST00000375661 GSTA5Q7RTV2 222 aa12□□□□□ -0.49
LSM2-208ENST00000375661 ZNF572Q7Z3I7 529 aaPredicted RBP12□□□□□ -0.49
LSM2-208ENST00000375661 HSD11B1LQ7Z5J1 315 aa12□□□□□ -0.49
LSM2-208ENST00000375661 NLRP8Q86W28 1048 aa12□□□□□ -0.49
LSM2-208ENST00000375661 ATCAYQ86WG3 371 aa12□□□□□ -0.49
LSM2-208ENST00000375661 KLHL7Q8IXQ5 586 aa12□□□□□ -0.49
LSM2-208ENST00000375661 SFRP1Q8N474 314 aa12□□□□□ -0.49
LSM2-208ENST00000375661 SPATA4Q8NEY3 305 aa12□□□□□ -0.49
LSM2-208ENST00000375661 MIB2Q96AX9 1013 aa12□□□□□ -0.49
LSM2-208ENST00000375661 SH3KBP1Q96B97 665 aa12□□□□□ -0.49
LSM2-208ENST00000375661 LYSMD1Q96S90 227 aa12□□□□□ -0.49
LSM2-208ENST00000375661 FICDQ9BVA6 458 aa12□□□□□ -0.49
LSM2-208ENST00000375661 ZMYND15Q9H091 742 aa12□□□□□ -0.49
LSM2-208ENST00000375661 EPB41L1Q9H4G0 881 aa12□□□□□ -0.49
LSM2-208ENST00000375661 STN1Q9H668 368 aaKnown RBP12□□□□□ -0.49
LSM2-208ENST00000375661 TMEM9Q9P0T7 183 aa12□□□□□ -0.49
LSM2-208ENST00000375661 PCYOX1Q9UHG3 505 aa12□□□□□ -0.49
LSM2-208ENST00000375661 KCTD3Q9Y597 815 aa12□□□□□ -0.49
LSM2-208ENST00000375661 GOLGA6CA6NDK9 693 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 GOLGA6BA6NDN3 693 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 NPIPB15A6NHN6 443 aaPredicted RBP11.99□□□□□ -0.49
LSM2-208ENST00000375661 STK17BO94768 372 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 AP2A1O95782 977 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 GOLGA6DP0CG33 693 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 PRKAR1AP10644 381 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 TCN2P20062 427 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 MPSTP25325 297 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 OAS2P29728 719 aaKnown RBP11.99□□□□□ -0.49
LSM2-208ENST00000375661 FDFT1P37268 417 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 GPR1P46091 355 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 EPHB1P54762 984 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 EPHA4P54764 986 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 SEMA5AQ13591 1074 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 SLC1A5Q15758 541 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 PYCR3Q53H96 274 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 SIRPB2Q5JXA9 342 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.99□□□□□ -0.49
LSM2-208ENST00000375661 DENND2CQ68D51 928 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 DENND5AQ6IQ26 1287 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 ADAMTSL4Q6UY14 1074 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 Q6ZVL8 140 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 USP45Q70EL2 814 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 TECPR1Q7Z6L1 1165 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 TSPAN33Q86UF1 283 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 RAVER1Q8IY67 606 aaKnown RBP11.99□□□□□ -0.49
LSM2-208ENST00000375661 NDUFAF2Q8N183 169 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 SLC25A41Q8N5S1 370 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 ESX1Q8N693 406 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 KIF18AQ8NI77 898 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 SLC37A2Q8TED4 501 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 PTCD2Q8WV60 388 aaKnown RBP11.99□□□□□ -0.49
LSM2-208ENST00000375661 STARD8Q92502 1023 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 SLCO2A1Q92959 643 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 PPP1R2P1Q96PQ5 205 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 APOL2Q9BQE5 337 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 ADGRE3Q9BY15 652 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 SARS2Q9NP81 518 aaKnown RBP11.99□□□□□ -0.49
LSM2-208ENST00000375661 RAB6BQ9NRW1 208 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 GOLGA6AQ9NYA3 693 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 FEZ2Q9UHY8 353 aaPredicted RBP11.99□□□□□ -0.49
LSM2-208ENST00000375661 SPO11Q9Y5K1 396 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 MRFAP1Q9Y605 127 aa11.99□□□□□ -0.49
LSM2-208ENST00000375661 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.98□□□□□ -0.49
LSM2-208ENST00000375661 PRR19A6NJB7 356 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 PSMD3O43242 534 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 ZNF500O60304 480 aaPredicted RBP11.98□□□□□ -0.49
LSM2-208ENST00000375661 DLGAP3O95886 979 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 PIRTP0C851 137 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 SLC2A4P14672 509 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 HLA-DPA1P20036 260 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 STAT5AP42229 794 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 POLD2P49005 469 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 VPS41P49754 854 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 HHEXQ03014 270 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 C2orf54Q08AI8 447 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 MSLNQ13421 630 aaPredicted RBP11.98□□□□□ -0.49
LSM2-208ENST00000375661 WHAMMP3Q1A5X7 153 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 DEFB109BQ30KR1 87 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 C4orf17Q53FE4 359 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 C4orf22Q6V702 233 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 ZNF765Q7L2R6 523 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 TIPARPQ7Z3E1 657 aaKnown RBP11.98□□□□□ -0.49
LSM2-208ENST00000375661 GALNT13Q8IUC8 556 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 AVL9Q8NBF6 648 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 GRK7Q8WTQ7 553 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 KRT12Q99456 494 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms