RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 WDR6Q9NNW5 1121 aaKnown RBP12.03□□□□□ -0.48
C9orf3-203ENST00000375315 CHRAC1Q9NRG0 131 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 RGS18Q9NS28 235 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 WBP1LQ9NX94 342 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 GTSE1Q9NYZ3 720 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 IL37Q9NZH6 218 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 ANAPC2Q9UJX6 822 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 WBP11Q9Y2W2 641 aaKnown RBP12.03□□□□□ -0.48
C9orf3-203ENST00000375315 PMF1-BGLAPU3KQ54 211 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 YJEFN3A6XGL0 299 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 ZNF623O75123 536 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 CAPN1P07384 714 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 ALDH4A1P30038 563 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 SULT1E1P49888 294 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 TYSND1Q2T9J0 566 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 SLC39A5Q6ZMH5 540 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 P2RY8Q86VZ1 359 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 PLD3Q8IV08 490 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 CRYBG2Q8N1P7 616 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 TOP6BLQ8N6T0 577 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 HMGCLL1Q8TB92 370 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 NXNL1Q96CM4 212 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 MCRS1Q96EZ8 462 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 MAP6Q96JE9 813 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 TBCBQ99426 244 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 GPR62Q9BZJ7 368 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 CAB39LQ9H9S4 337 aa12.03□□□□□ -0.48
C9orf3-203ENST00000375315 H0Y626 953 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 M0QYT0 321 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 NME4O00746 187 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 TBC1D4O60343 1298 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 THRBP10828 461 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 OR2B6P58173 313 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 VBP1P61758 197 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 EIF2B5Q13144 721 aaKnown RBP12.02□□□□□ -0.48
C9orf3-203ENST00000375315 SPANXN3Q5MJ09 141 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 BRMS1LQ5PSV4 323 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 PRSS48Q7RTY5 328 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 MRPL10Q7Z7H8 261 aaKnown RBP12.02□□□□□ -0.48
C9orf3-203ENST00000375315 DEPDC4Q8N2C3 294 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 CADM2Q8N3J6 435 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 IL17RDQ8NFM7 739 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 RORBQ92753 470 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 OMA1Q96E52 524 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 DUSP16Q9BY84 665 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 PAK6Q9NQU5 681 aaPredicted RBP12.02□□□□□ -0.48
C9orf3-203ENST00000375315 ZNF639Q9UID6 485 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 MAGED2Q9UNF1 606 aaPredicted RBP12.02□□□□□ -0.48
C9orf3-203ENST00000375315 ANKRD6Q9Y2G4 727 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 SNX10Q9Y5X0 201 aa12.02□□□□□ -0.48
C9orf3-203ENST00000375315 THSD7BQ9C0I4 1608 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 C2CD4BA6NLJ0 364 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 BBIP1A8MTZ0 92 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 TMEM233B4DJY2 109 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 H0Y858 1186 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 ARPC2O15144 300 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 CCDC159P0C7I6 412 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 UMPSP11172 480 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 CPB1P15086 417 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 CSF2RAP15509 400 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 OR3A3P47888 321 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 PRSS55Q6UWB4 352 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-203ENST00000375315 TAS1R1Q7RTX1 841 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 CLEC4FQ8N1N0 589 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 SPPL2BQ8TCT7 592 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.02□□□□□ -0.494e-7■■■■■ 53.9
C9orf3-203ENST00000375315 RTP3Q9BQQ7 232 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 ATP13A2Q9NQ11 1180 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 PAQR5Q9NXK6 330 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-203ENST00000375315 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-203ENST00000375315 FIS1Q9Y3D6 152 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 UNC80Q8N2C7 3258 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 ERVH48-1M5A8F1 160 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 SNX2O60749 519 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 STAU1O95793 577 aaKnown RBP12.02□□□□□ -0.49
C9orf3-203ENST00000375315 HTR1AP08908 422 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 PTGS2P35354 604 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 ALDH3A2P51648 485 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 DPY19L1Q2PZI1 675 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 NAT16Q8N8M0 369 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 ARNTL2Q8WYA1 636 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 KHSRPQ92945 711 aaKnown RBP eCLIP12.02□□□□□ -0.492e-6■■■□□ 16
C9orf3-203ENST00000375315 PEX13Q92968 403 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 MFSD3Q96ES6 412 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 CNPY3Q9BT09 278 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 SIK2Q9H0K1 926 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 MUC13Q9H3R2 512 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 MFHAS1Q9Y4C4 1052 aa12.02□□□□□ -0.49
C9orf3-203ENST00000375315 A0A1W2PQ72 361 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 SCAMP3O14828 347 aaKnown RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 MAGP20916 626 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 WARSP23381 471 aaKnown RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 ITGB8P26012 769 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 LHX1P48742 406 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 ZNF143P52747 638 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 ARSFP54793 590 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 CTAG1AP78358 180 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 PIGFQ07326 219 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 FRG1Q14331 258 aaKnown RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 ACOX1Q15067 660 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms