RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 QTRT2Q9H974 415 aaKnown RBP10.09□□□□□ -0.79
PTCH1-204ENST00000375290 NEUROD4Q9HD90 331 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 ASB4Q9Y574 426 aa10.09□□□□□ -0.79
PTCH1-204ENST00000375290 MATN3O15232 486 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 RASAL1O95294 804 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 TRBC1P01850 177 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 C9P02748 559 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 SOX11P35716 441 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 ARCN1P48444 511 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 AP2S1P53680 142 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 STARD3Q14849 445 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CA9Q16790 459 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 IFI44LQ53G44 452 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 GCNT6Q5T4J0 391 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 ASRGL1Q7L266 308 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 KCNK18Q7Z418 384 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 SIX5Q8N196 739 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CENPSQ8N2Z9 138 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 TCAF1Q9Y4C2 921 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 IFNA6P05013 189 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 ZSCAN5DPP0CG00 497 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 GOT1P17174 413 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CD86P42081 329 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 KCNC3Q14003 757 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 SPIN4Q56A73 249 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 XYLT1Q86Y38 959 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PRMT6Q96LA8 375 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CCDC3Q9BQI4 270 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 TBCDQ9BTW9 1192 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PNMA8BQ9ULN7 279 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PCDHGB5Q9Y5G0 923 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 KANTRA0A1W2PQU2 76 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 DCDC2CA8MYV0 355 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PRPS1L1P21108 318 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 SLC9A3P48764 834 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 METTL2BQ6P1Q9 378 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 GEMIN6Q8WXD5 167 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 LRTOMTQ8WZ04 291 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 AKT1S1Q96B36 256 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 MARCH2Q9P0N8 246 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 LYVE1Q9Y5Y7 322 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PRAMEF33A0A0G2JMD5 474 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PRAMEF10O60809 474 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 ARHGEF15O94989 841 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 OR6A2O95222 327 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 URODP06132 367 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 TACSTD2P09758 323 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 FPR1P21462 350 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 AGTR1P30556 359 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 HLCSP50747 726 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 HECTD2Q5U5R9 776 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 DEF8Q6ZN54 512 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 ZNF781Q8N8C0 355 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CMASQ8NFW8 434 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 SMG7Q92540 1137 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 NUP50Q9UKX7 468 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 LOXHD1Q8IVV2 1947 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 UBE2Q2LH0YL09 131 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CXCR6O00574 342 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 SLITRK5O94991 958 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CLK2P49760 499 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 TAS2R41P59536 307 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 ZNF33BQ06732 778 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 GRIK4Q16099 956 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CAPN13Q6MZZ7 669 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 POF1BQ8WVV4 589 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 NACC2Q96BF6 587 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 FOLH1BQ9HBA9 442 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 DNAJC11Q9NVH1 559 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PCDHGB2Q9Y5G2 931 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 DUXAA6NLW8 204 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 ARSHQ5FYA8 562 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 OR2T5Q6IEZ7 315 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 MIB1Q86YT6 1006 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 OR2T29Q8NH02 315 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 ZNF514Q96K75 400 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 DEFB129Q9H1M3 183 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 NPAP1Q9NZP6 1156 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 ENTPD6O75354 484 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 NR2C1P13056 603 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 TAS2R40P59535 323 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 KIAA1614Q5VZ46 1190 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 USP30Q70CQ3 517 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 UBE2Q1Q7Z7E8 422 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PIGXQ8TBF5 258 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CNDP2Q96KP4 475 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 NIFKQ9BYG3 293 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 UNKLQ9H9P5 680 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 GPATCH2LQ9NWQ4 482 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 TYROBPO43914 113 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PIGRP01833 764 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 PKMP14618 531 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CD36P16671 472 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 CYP4F3Q08477 520 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 FOXD4Q12950 439 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 SMAD1Q15797 465 aaKnown RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 ANKRD22Q5VYY1 191 aa10.08□□□□□ -0.8
PTCH1-204ENST00000375290 DNAJC14Q6Y2X3 702 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-204ENST00000375290 AGMOQ6ZNB7 445 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms