RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 VPS33AQ96AX1 596 aa18.06■□□□□ 0.48
RXRB-202ENST00000374685 MPP4Q96JB8 637 aa18.06■□□□□ 0.48
RXRB-202ENST00000374685 CRISPLD2Q9H0B8 497 aa18.06■□□□□ 0.48
RXRB-202ENST00000374685 NSUN3Q9H649 340 aaKnown RBP18.06■□□□□ 0.48
RXRB-202ENST00000374685 NOL11Q9H8H0 719 aaKnown RBP18.06■□□□□ 0.48
RXRB-202ENST00000374685 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.06■□□□□ 0.48
RXRB-202ENST00000374685 ZNF225Q9UK10 706 aa18.06■□□□□ 0.48
RXRB-202ENST00000374685 SH3GLB1Q9Y371 365 aa18.06■□□□□ 0.48
RXRB-202ENST00000374685 PCDHGA7Q9Y5G6 932 aa18.06■□□□□ 0.48
RXRB-202ENST00000374685 PIKFYVEQ9Y2I7 2098 aa18.06■□□□□ 0.48
RXRB-202ENST00000374685 H3BNX3 289 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 NRP2O60462 931 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 MTX2O75431 263 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 BAIAP3O94812 1187 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 OLFM2O95897 454 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 GLUD1P00367 558 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 SLC7A2P52569 658 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 NFATC2Q13469 925 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 ASTLQ6HA08 431 aaPredicted RBP18.05■□□□□ 0.48
RXRB-202ENST00000374685 ZNF783Q6ZMS7 281 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 KBTBD6Q86V97 674 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 KCNJ9Q92806 393 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 MAGEE1Q9HCI5 957 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 PAIP2BQ9ULR5 123 aaKnown RBP18.05■□□□□ 0.48
RXRB-202ENST00000374685 GLYATL1P3A0A0U1RQE8 302 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 CAPN8A6NHC0 703 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 LILRB3O75022 631 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 ZNF821O75541 412 aaPredicted RBP18.05■□□□□ 0.48
RXRB-202ENST00000374685 ESR1P03372 595 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 SRCP12931 536 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 ITGALP20701 1170 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 SERPINA4P29622 427 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 HSPA7P48741 367 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 CLCN7P51798 805 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 YBX1P67809 324 aaKnown RBP18.05■□□□□ 0.48
RXRB-202ENST00000374685 PLOD1Q02809 727 aaPredicted RBP18.05■□□□□ 0.48
RXRB-202ENST00000374685 AAGABQ6PD74 315 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 IFNEQ86WN2 208 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 CHST14Q8NCH0 376 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 OR2AP1Q8NGE2 309 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 KLHL32Q96NJ5 620 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 RETREG1Q9H6L5 497 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 PCTPQ9UKL6 214 aa18.05■□□□□ 0.48
RXRB-202ENST00000374685 hCG_2014768A0A024R1R8 64 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 KRT87PA6NCN2 255 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 PER2O15055 1255 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 RNASEH1O60930 286 aaKnown RBP18.04■□□□□ 0.48
RXRB-202ENST00000374685 ZNF7P17097 686 aaPredicted RBP18.04■□□□□ 0.48
RXRB-202ENST00000374685 CTNNB1P35222 781 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 GALNT1Q10472 559 aaPredicted RBP18.04■□□□□ 0.48
RXRB-202ENST00000374685 MAP7D1Q3KQU3 841 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 FUT11Q495W5 492 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 SGO1Q5FBB7 561 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 LRRC66Q68CR7 880 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 DPY19L3Q6ZPD9 716 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 RETREG3Q86VR2 466 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 CYB5D2Q8WUJ1 264 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 ACDQ96AP0 544 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 SEMA6AQ9H2E6 1030 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 PIF1Q9H611 641 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 PRORSD1PA6NEY8 169 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 GAPDHSO14556 408 aaPredicted RBP18.04■□□□□ 0.48
RXRB-202ENST00000374685 FFAR3O14843 346 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 GPR42O15529 346 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 HERC3Q15034 1050 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 KANK2Q63ZY3 851 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 DUS1LQ6P1R4 473 aaKnown RBP18.04■□□□□ 0.48
RXRB-202ENST00000374685 HTR3DQ70Z44 454 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 RBM23Q86U06 439 aaKnown RBP18.04■□□□□ 0.48
RXRB-202ENST00000374685 GALNT4Q8N4A0 578 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 GPR26Q8NDV2 337 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 LRRC3Q9BY71 257 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 HNRNPCP07910 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
RXRB-202ENST00000374685 IDO1P14902 403 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 ADSLP30566 484 aaPredicted RBP18.04■□□□□ 0.48
RXRB-202ENST00000374685 GRM2Q14416 872 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 MAPRE2Q15555 327 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 TEX37Q96LM6 180 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 SLC25A23Q9BV35 468 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 DNMT3BQ9UBC3 853 aaKnown RBP18.04■□□□□ 0.48
RXRB-202ENST00000374685 WNT6Q9Y6F9 365 aa18.04■□□□□ 0.48
RXRB-202ENST00000374685 SLC22A2O15244 555 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 LBPP18428 481 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 CAPN3P20807 821 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 HTR6P50406 440 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 CCDC149Q6ZUS6 474 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 MIER2Q8N344 545 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 LRGUKQ96M69 825 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 EGFL7Q9UHF1 273 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 ANGPT2O15123 496 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 RPS17P08708 135 aaKnown RBP18.03■□□□□ 0.48
RXRB-202ENST00000374685 ZNF24P17028 368 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 GPX3P22352 226 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 GRIA2P42262 883 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 TMED1Q13445 227 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 LRP8Q14114 963 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.03■□□□□ 0.48
RXRB-202ENST00000374685 LETMD1Q6P1Q0 360 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 GPRIN3Q6ZVF9 776 aa18.03■□□□□ 0.48
RXRB-202ENST00000374685 FIBINQ8TAL6 211 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms