RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 TUBB1Q9H4B7 451 aa11.95□□□□□ -0.5
HMGCL-202ENST00000374487 ZDHHC7Q9NXF8 308 aa11.95□□□□□ -0.5
HMGCL-202ENST00000374487 SUCOQ9UBS9 1254 aaKnown RBP11.95□□□□□ -0.5
HMGCL-202ENST00000374487 ZNF510Q9Y2H8 683 aa11.95□□□□□ -0.5
HMGCL-202ENST00000374487 TIMM22Q9Y584 194 aa11.95□□□□□ -0.5
HMGCL-202ENST00000374487 PCDHB1Q9Y5F3 818 aa11.95□□□□□ -0.5
HMGCL-202ENST00000374487 TTC28Q96AY4 2481 aa11.95□□□□□ -0.5
HMGCL-202ENST00000374487 BBIP1A8MTZ0 92 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 GFRA2O00451 464 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 ANGPT2O15123 496 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 KLK8O60259 260 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 STAMBPO95630 424 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 ESRRBO95718 433 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 ZNF7P17097 686 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 ARL1P40616 181 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 RPL26P61254 145 aaKnown RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 ECT2LQ008S8 904 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 PUS10Q3MIT2 529 aaKnown RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 MPPE1Q53F39 396 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 SAMD4BQ5PRF9 694 aaKnown RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 GAREM2Q75VX8 874 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 GET4Q7L5D6 327 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 EFL1Q7Z2Z2 1120 aaKnown RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 FUNDC1Q8IVP5 155 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 BBS7Q8IWZ6 715 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 ASB8Q9H765 288 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 COPS7BQ9H9Q2 264 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 KIAA1522Q9P206 1035 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 POLG2Q9UHN1 485 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 TSR3Q9UJK0 312 aaKnown RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 PCTPQ9UKL6 214 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 SARDHQ9UL12 918 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 DTNAQ9Y4J8 743 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 MTCL1Q9Y4B5 1905 aaKnown RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 A0A1B0GTL3 188 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 LOC730098B7Z3J9 87 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 UROSP10746 265 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 IDO1P14902 403 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 UQCRBP14927 111 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 GKP32189 559 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 PSMD8P48556 350 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 CLCN7P51798 805 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 RALGDSQ12967 914 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 TGFBIQ15582 683 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 OGFRL1Q5TC84 451 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 HACD2Q6Y1H2 254 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 HTR3DQ70Z44 454 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 SERPINA9Q86WD7 417 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 FAM217AQ8IXS0 508 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 ZNF483Q8TF39 744 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-202ENST00000374487 ESAMQ96AP7 390 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 ROPN1LQ96C74 230 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 RIPOR3Q96MK2 946 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 GCNAQ96QF7 691 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 C1QTNF3Q9BXJ4 246 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 CIPCQ9C0C6 399 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 PCDHAC1Q9H158 963 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 P2RY12Q9H244 342 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 TNKS2Q9H2K2 1166 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 ATP13A3Q9H7F0 1226 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 LIMD1Q9UGP4 676 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 MUTYHQ9UIF7 546 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 APPL1Q9UKG1 709 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 DHRS7Q9Y394 339 aa11.94□□□□□ -0.5
HMGCL-202ENST00000374487 TRAV19A0A0A6YYK7 116 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 TXNDC9O14530 226 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 IGSF6O95976 241 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 S100BP04271 92 aaPredicted RBP11.93□□□□□ -0.5
HMGCL-202ENST00000374487 RHOP08100 348 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 VCLP18206 1134 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 ITGALP20701 1170 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 PRDX3P30048 256 aaKnown RBP11.93□□□□□ -0.5
HMGCL-202ENST00000374487 MTHFRP42898 656 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 HK3P52790 923 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 VPS26BQ4G0F5 336 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 MPP7Q5T2T1 576 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 GPRIN3Q6ZVF9 776 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 SYVN1Q86TM6 617 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
HMGCL-202ENST00000374487 TMEM126BQ8IUX1 230 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 RBFAQ8N0V3 343 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 ELMOD1Q8N336 334 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 SLC39A3Q9BRY0 314 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 RPP25Q9BUL9 199 aaKnown RBP11.93□□□□□ -0.5
HMGCL-202ENST00000374487 NUSAP1Q9BXS6 441 aaKnown RBP11.93□□□□□ -0.5
HMGCL-202ENST00000374487 EPHX3Q9H6B9 360 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 IL1RL2Q9HB29 575 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 EIF2B4Q9UI10 523 aaKnown RBP11.93□□□□□ -0.5
HMGCL-202ENST00000374487 NDUFAF1Q9Y375 327 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 NOTCH4Q99466 2003 aa11.93□□□□□ -0.5
HMGCL-202ENST00000374487 A0A1W2PRU2 124 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 PRORSD1PA6NEY8 169 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CAPN8A6NHC0 703 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 A8MX80 341 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 TRIM24O15164 1050 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 SOCS5O75159 536 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CLDN7O95471 211 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 TRBC1P01850 177 aa11.92□□□□□ -0.5
HMGCL-202ENST00000374487 CYBBP04839 570 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms