RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 CD9P21926 228 aa12.67□□□□□ -0.38
GPC3-201ENST00000370818 HLA-FP30511 346 aa12.67□□□□□ -0.38
GPC3-201ENST00000370818 CTSOP43234 321 aaPredicted RBP12.67□□□□□ -0.38
GPC3-201ENST00000370818 CSNK1DP48730 415 aa12.67□□□□□ -0.38
GPC3-201ENST00000370818 RAD51Q06609 339 aa12.67□□□□□ -0.38
GPC3-201ENST00000370818 CDKN3Q16667 212 aa12.67□□□□□ -0.38
GPC3-201ENST00000370818 PPP1R3AQ16821 1122 aa12.67□□□□□ -0.38
GPC3-201ENST00000370818 UGT3A2Q3SY77 523 aa12.67□□□□□ -0.38
GPC3-201ENST00000370818 ZSWIM9Q86XI8 627 aa12.67□□□□□ -0.38
GPC3-201ENST00000370818 STAG3L4Q8TBR4 150 aa12.67□□□□□ -0.38
GPC3-201ENST00000370818 CD200R1Q8TD46 325 aa12.67□□□□□ -0.38
GPC3-201ENST00000370818 FUBP1Q96AE4 644 aaKnown RBP12.67□□□□□ -0.38
GPC3-201ENST00000370818 RPL10LQ96L21 214 aaKnown RBP12.67□□□□□ -0.38
GPC3-201ENST00000370818 NSUN5Q96P11 429 aaKnown RBP12.67□□□□□ -0.38
GPC3-201ENST00000370818 GPATCH1Q9BRR8 931 aaKnown RBP12.67□□□□□ -0.38
GPC3-201ENST00000370818 PAIP1Q9H074 479 aaKnown RBP12.67□□□□□ -0.38
GPC3-201ENST00000370818 TSC22D4Q9Y3Q8 395 aa12.67□□□□□ -0.38
GPC3-201ENST00000370818 GPC6Q9Y625 555 aaPredicted RBP12.67□□□□□ -0.38
GPC3-201ENST00000370818 A0A0J9YYE9 177 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 ECI2O75521 394 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 RFPL2O75678 378 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 TRBC1P01850 177 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 FGBP02675 491 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 CA5AP35218 305 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 STK19P49842 368 aaPredicted RBP12.66□□□□□ -0.38
GPC3-201ENST00000370818 ATP6V0D1P61421 351 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 BCL2L1Q07817 233 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 AARS2Q5JTZ9 985 aaKnown RBP12.66□□□□□ -0.38
GPC3-201ENST00000370818 RARS2Q5T160 578 aaKnown RBP12.66□□□□□ -0.38
GPC3-201ENST00000370818 MRPL43Q8N983 215 aaKnown RBP12.66□□□□□ -0.38
GPC3-201ENST00000370818 ADCY4Q8NFM4 1077 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 GRIN3AQ8TCU5 1115 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 KCNJ9Q92806 393 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 LRGUKQ96M69 825 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 P2RY12Q9H244 342 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 DOCK6Q96HP0 2047 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.66□□□□□ -0.38
GPC3-201ENST00000370818 NPEPPSL1A6NEC2 478 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 IQCF5A8MTL0 148 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 AIM2O14862 343 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 SOCS5O75159 536 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 MOSPD3O75425 235 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 VPS26AO75436 327 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 GFAPP14136 432 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 PTGER3P43115 390 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 NUDT2P50583 147 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 CACNG1Q06432 222 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 ADGRE1Q14246 886 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 HERC3Q15034 1050 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 ZNF829Q3KNS6 432 aaPredicted RBP12.66□□□□□ -0.38
GPC3-201ENST00000370818 PLPP4Q5VZY2 271 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 TAS2R42Q7RTR8 314 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 TMEM126BQ8IUX1 230 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 CENPSQ8N2Z9 138 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 HMGCLL1Q8TB92 370 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 EEF1AKMT1Q8WVE0 214 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 EMILIN2Q9BXX0 1053 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 ZFYVE1Q9HBF4 777 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 RIMS3Q9UJD0 308 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 RNF112Q9ULX5 631 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 RNF11Q9Y3C5 154 aa12.66□□□□□ -0.38
GPC3-201ENST00000370818 C1orf232A0A0U1RR37 186 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 A0A1B0GTL3 188 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 PFDN6O15212 129 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 CLASP2O75122 1294 aaKnown RBP12.65□□□□□ -0.38
GPC3-201ENST00000370818 ESR1P03372 595 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 SRCP12931 536 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 PFKLP17858 780 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 HNF1BP35680 557 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 MAPK8P45983 427 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 FBXO48Q5FWF7 155 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 PITRM1Q5JRX3 1037 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 NANOGP8Q6NSW7 305 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 FAM151BQ6UXP7 276 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 LILRA2Q8N149 483 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 GALNT4Q8N4A0 578 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 AFAP1L2Q8N4X5 818 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 NKAPQ8N5F7 415 aaKnown RBP12.65□□□□□ -0.38
GPC3-201ENST00000370818 CATSPER1Q8NEC5 780 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 PLEKHA8Q96JA3 519 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 C3orf30Q96M34 536 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 TRMT6Q9UJA5 497 aaKnown RBP12.65□□□□□ -0.38
GPC3-201ENST00000370818 DNAJC15Q9Y5T4 150 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 CHD7Q9P2D1 2997 aa12.65□□□□□ -0.38
GPC3-201ENST00000370818 SUPT3HB4E1H0 165 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 K7EPI3 171 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 BTN3A1O00481 513 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 KLK8O60259 260 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 CLDN7O95471 211 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 CAPNS1P04632 268 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 FGF4P08620 206 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 CHRM3P20309 590 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 CLCN7P51798 805 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 EPHA5P54756 1037 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 FOXA1P55317 472 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 TEAD2Q15562 447 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 FUT11Q495W5 492 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 DEPDC1Q5TB30 811 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 ASTLQ6HA08 431 aaPredicted RBP12.65□□□□□ -0.39
GPC3-201ENST00000370818 TMEM25Q86YD3 366 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms