RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 NRTNQ99748 197 aa12.9□□□□□ -0.34
RPF1-201ENST00000370654 HEMGNQ9BXL5 484 aa12.9□□□□□ -0.34
RPF1-201ENST00000370654 KLHL8Q9P2G9 620 aaPredicted RBP12.9□□□□□ -0.34
RPF1-201ENST00000370654 ARL5AQ9Y689 179 aa12.9□□□□□ -0.34
RPF1-201ENST00000370654 SPENQ96T58 3664 aaKnown RBP12.9□□□□□ -0.34
RPF1-201ENST00000370654 RELNP78509 3460 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 HECTD1Q9ULT8 2610 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 PSTPIP1O43586 416 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 SGTAO43765 313 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 SPAG6O75602 509 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 NDUFA10O95299 355 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 FGF5P12034 268 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 RBL1P28749 1068 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 PBLDP30039 288 aaPredicted RBP12.89□□□□□ -0.35
RPF1-201ENST00000370654 SPAM1P38567 509 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 TFDP2Q14188 446 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 MAP7Q14244 749 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 ERV3-1Q14264 604 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 CCDC70Q6NSX1 233 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 FBXO38Q6PIJ6 1188 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 DET1Q7L5Y6 550 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 GLT6D1Q7Z4J2 308 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 ESX1Q8N693 406 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 LILRA3Q8N6C8 439 aaPredicted RBP12.89□□□□□ -0.35
RPF1-201ENST00000370654 TC2NQ8N9U0 490 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 AVL9Q8NBF6 648 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 DDHD1Q8NEL9 900 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
RPF1-201ENST00000370654 COL26A1Q96A83 441 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 PPM1MQ96MI6 270 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 CATSPER2Q96P56 530 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 QKIQ96PU8 341 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPF1-201ENST00000370654 INSM2Q96T92 566 aaPredicted RBP12.89□□□□□ -0.35
RPF1-201ENST00000370654 FAM118BQ9BPY3 351 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 APOL2Q9BQE5 337 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 INTUQ9ULD6 942 aa12.89□□□□□ -0.35
RPF1-201ENST00000370654 GLYATL1P3A0A0U1RQE8 302 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 RCCD1A6NED2 376 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 AKR1B15C9JRZ8 316 aaPredicted RBP12.88□□□□□ -0.35
RPF1-201ENST00000370654 TOX3O15405 576 aaPredicted RBP12.88□□□□□ -0.35
RPF1-201ENST00000370654 DDX3YO15523 660 aaKnown RBP12.88□□□□□ -0.35
RPF1-201ENST00000370654 EPOP01588 193 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 NELFEP18615 380 aaKnown RBP12.88□□□□□ -0.35
RPF1-201ENST00000370654 TCN2P20062 427 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 FECHP22830 423 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 MAGEA1P43355 309 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 HADHBP55084 474 aaKnown RBP12.88□□□□□ -0.35
RPF1-201ENST00000370654 DMPKQ09013 629 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 MSLNQ13421 630 aaPredicted RBP12.88□□□□□ -0.35
RPF1-201ENST00000370654 PPP2R5EQ16537 467 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 ODF2Q5BJF6 829 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 TFDP3Q5H9I0 405 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 PWWP2BQ6NUJ5 590 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 AADACL2Q6P093 401 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 AMZ2Q86W34 360 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 RASGRP3Q8IV61 690 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 KATNAL2Q8IYT4 538 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 C9orf43Q8TAL5 461 aaPredicted RBP12.88□□□□□ -0.35
RPF1-201ENST00000370654 P3H4Q92791 437 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 SLC41A2Q96JW4 573 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 MAP3K3Q99759 626 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 FICDQ9BVA6 458 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 TRIT1Q9H3H1 467 aaKnown RBP12.88□□□□□ -0.35
RPF1-201ENST00000370654 TSPY26PQ9H489 355 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 SEMA5BQ9P283 1151 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 EPHA6Q9UF33 1036 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 TUBD1Q9UJT1 453 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 KCNMB2Q9Y691 235 aa12.88□□□□□ -0.35
RPF1-201ENST00000370654 UBR5O95071 2799 aaPredicted RBP12.87□□□□□ -0.35
RPF1-201ENST00000370654 GOLGA6L3A6NEY3 463 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 KATNA1O75449 491 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 ZRANB2O95218 330 aaKnown RBP eCLIP12.87□□□□□ -0.35
RPF1-201ENST00000370654 PDGFAP04085 211 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 EBLN1P0CF75 366 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 ADRA1AP35348 466 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 ARCN1P48444 511 aaKnown RBP12.87□□□□□ -0.35
RPF1-201ENST00000370654 GTF2H3Q13889 308 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 IL11RAQ14626 422 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 FNBP1LQ5T0N5 605 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 FAM199XQ6PEV8 388 aaPredicted RBP12.87□□□□□ -0.35
RPF1-201ENST00000370654 BBS12Q6ZW61 710 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 BZW1Q7L1Q6 419 aaKnown RBP12.87□□□□□ -0.35
RPF1-201ENST00000370654 RCOR2Q8IZ40 523 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 DTX3LQ8TDB6 740 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 BRSK1Q8TDC3 778 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 CT55Q8WUE5 264 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 APOBEC4Q8WW27 367 aaKnown RBP12.87□□□□□ -0.35
RPF1-201ENST00000370654 SRPK1Q96SB4 655 aaKnown RBP12.87□□□□□ -0.35
RPF1-201ENST00000370654 RAB33BQ9H082 229 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 WWP1Q9H0M0 922 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 TRABDQ9H4I3 376 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 FAM8A1Q9UBU6 413 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 RSPH14Q9UHP6 348 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 FKBPLQ9UIM3 349 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 LNPEPQ9UIQ6 1025 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 TP53TG5Q9Y2B4 290 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 PCDHA13Q9Y5I0 950 aa12.87□□□□□ -0.35
RPF1-201ENST00000370654 CCL22O00626 93 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 LCA5LO95447 670 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 NTRK1P04629 796 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms