RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 ERVK-6Q9BXR3 956 aa17.74■□□□□ 0.43
CHTOP-201ENST00000368686 INTS7Q9NVH2 962 aaKnown RBP17.74■□□□□ 0.43
CHTOP-201ENST00000368686 ARIH1Q9Y4X5 557 aaPredicted RBP17.74■□□□□ 0.43
CHTOP-201ENST00000368686 A0A1W2PQ72 361 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 KRT87PA6NCN2 255 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 DCLK1O15075 740 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 NCAM2O15394 837 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 PSMD3O43242 534 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 SSX4O60224 188 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 GGT1P19440 569 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 CASP2P42575 452 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 NFKB2Q00653 900 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 BNC1Q01954 994 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 DEPDC4Q8N2C3 294 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 CLEC4CQ8WTT0 213 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 TMCO6Q96DC7 493 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 TSPAN17Q96FV3 270 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 ITPAQ9BY32 194 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 PLEKHA5Q9HAU0 1116 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 DNMT3LQ9UJW3 386 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 C12orf71A8MTZ7 269 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 A8MV72 311 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-201ENST00000368686 MTRF1O75570 445 aaKnown RBP17.73■□□□□ 0.43
CHTOP-201ENST00000368686 IL7P13232 177 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 ITGA2P17301 1181 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 CTRB1P17538 263 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 SLC15A1P46059 708 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 MXD4Q14582 209 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-201ENST00000368686 SPANXN2Q5MJ10 180 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 CTRB2Q6GPI1 263 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 DENND5AQ6IQ26 1287 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 ZNF598Q86UK7 904 aaKnown RBP17.73■□□□□ 0.43
CHTOP-201ENST00000368686 TMEM130Q8N3G9 435 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 VAT1Q99536 393 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 CENPOQ9BU64 300 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 DBNDD1Q9H9R9 158 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 PTPRHQ9HD43 1115 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 TRMT13Q9NUP7 481 aaKnown RBP17.73■□□□□ 0.43
CHTOP-201ENST00000368686 DPP3Q9NY33 737 aa17.73■□□□□ 0.43
CHTOP-201ENST00000368686 GRXCR2A6NFK2 248 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 CDK14O94921 469 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 DBTP11182 482 aaKnown RBP17.72■□□□□ 0.43
CHTOP-201ENST00000368686 CES1P23141 567 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 CYP2C18P33260 490 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 BCAT1P54687 386 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 LRRC26Q2I0M4 334 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 Q5BKY6 102 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 TJAP1Q5JTD0 557 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 DACT2Q5SW24 774 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 ATF7IP2Q5U623 682 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 ANKRD34AQ69YU3 496 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 CYP20A1Q6UW02 462 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 GLRX5Q86SX6 157 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 ADHFE1Q8IWW8 467 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 ZNF540Q8NDQ6 660 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 KBTBD8Q8NFY9 601 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 CDADC1Q9BWV3 514 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 MID1IP1Q9NPA3 183 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 AIG1Q9NVV5 245 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 SMPD4Q9NXE4 827 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 SLAMF8Q9P0V8 285 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 SNX6Q9UNH7 406 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 PCDHB14Q9Y5E9 798 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 BTAF1O14981 1849 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 TEX51A0A1B0GUA7 166 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 CLRN2A0PK11 232 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 hCG_2039718K7EN88 272 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 FTH1P02794 183 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 CYBBP04839 570 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 PAMP19021 973 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 FMO4P31512 558 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 SLC26A3P40879 764 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 ZFP36L2P47974 494 aaKnown RBP17.72■□□□□ 0.43
CHTOP-201ENST00000368686 DIO3P55073 304 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 BAATQ14032 418 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-201ENST00000368686 BCL7AQ4VC05 210 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 RBM20Q5T481 1227 aaKnown RBP17.72■□□□□ 0.43
CHTOP-201ENST00000368686 KIAA0319Q5VV43 1072 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 NECAB2Q7Z6G3 386 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 ABI1Q8IZP0 508 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 PPHLN1Q8NEY8 458 aaKnown RBP17.72■□□□□ 0.43
CHTOP-201ENST00000368686 FLAD1Q8NFF5 587 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 TOR1AIP2Q8NFQ8 470 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 FRS2Q8WU20 508 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 FCGR1BQ92637 280 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 B3GNT4Q9C0J1 378 aa17.72■□□□□ 0.43
CHTOP-201ENST00000368686 A0A0X1KG70 313 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 ACKR2O00590 384 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 AP3D1O14617 1153 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 SLC22A3O75751 556 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 PGLSO95336 258 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 ETV3P41162 512 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 POLR2JP52435 117 aaKnown RBP17.71■□□□□ 0.43
CHTOP-201ENST00000368686 CDH13P55290 713 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 TAGLNQ01995 201 aaKnown RBP17.71■□□□□ 0.43
CHTOP-201ENST00000368686 RAD51Q06609 339 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 TARBP2Q15633 366 aaKnown RBP17.71■□□□□ 0.43
CHTOP-201ENST00000368686 SLC14A2Q15849 920 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 PARP15Q460N3 678 aa17.71■□□□□ 0.43
CHTOP-201ENST00000368686 ESRP1Q6NXG1 681 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms