RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 FGF18O76093 207 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 STAU1O95793 577 aaKnown RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 ITGA3P26006 1051 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 PRKAR1BP31321 381 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 SLC7A2P52569 658 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 UGT2B15P54855 530 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 CNTN2Q02246 1040 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 PROSER1Q86XN7 944 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 UBA3Q8TBC4 463 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF333Q96JL9 665 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 GFM1Q96RP9 751 aaKnown RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 KCTD14Q9BQ13 255 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 GPN1Q9HCN4 374 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 PCDHAC2Q9Y5I4 1007 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 A0A0X1KG70 313 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 BCLAF3A2AJT9 711 aaKnown RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 C5orf51A6NDU8 294 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 TSTD3H0UI37 97 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 PIK3CDO00329 1044 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 MED24O75448 989 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 SUPT7LO94864 414 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 SLC25A14O95258 325 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 CYP17A1P05093 508 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 MAGP20916 626 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 DGKAP23743 735 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 GP5P40197 560 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 MLLT3P42568 568 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 CYP4F2P78329 520 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 DLG4P78352 724 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 CYP4F3Q08477 520 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 DGCR6Q14129 220 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 FAM76BQ5HYJ3 339 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 PDPK2PQ6A1A2 396 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 GPAT2Q6NUI2 795 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 KDELC1Q6UW63 502 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 RBM44Q6ZP01 1051 aaKnown RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 DENND1CQ8IV53 801 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 EEF1AKMT1Q8WVE0 214 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 ELMO1Q92556 727 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 MYLPFQ96A32 169 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 FAM120BQ96EK7 910 aaKnown RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 DMRTB1Q96MA1 342 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 COG8Q96MW5 612 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 FRMD6Q96NE9 622 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 SPATA5L1Q9BVQ7 753 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 CPVLQ9H3G5 476 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 GAREM1Q9H706 876 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 ACTR3BQ9P1U1 418 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 ASF1AQ9Y294 204 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 LTBP4Q8N2S1 1624 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 SHISA7A6NL88 538 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 MDM4O15151 490 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TIMP1P01033 207 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 PRKAR1AP10644 381 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 NELFEP18615 380 aaKnown RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 DRD1P21728 446 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 CASP1P29466 404 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ARHGDIBP52566 201 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 MAD2L1Q13257 205 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 CA9Q16790 459 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 NYAP1Q6ZVC0 841 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF605Q86T29 641 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 GALNT12Q8IXK2 581 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 NAXEQ8NCW5 288 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 NEK7Q8TDX7 302 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 PNPLA2Q96AD5 504 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TESCQ96BS2 214 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 SLC29A1Q99808 456 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 MCMBPQ9BTE3 642 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 FRMD8P1Q9BZ68 369 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 BCL2L14Q9BZR8 327 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 AGO4Q9HCK5 861 aaKnown RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 NECTIN3Q9NQS3 549 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF780BQ9Y6R6 833 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 NHSL1Q5SYE7 1610 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TRAV20A0A0B4J274 112 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 NR5A2O00482 541 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ABLIM1O14639 778 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 CHP2O43745 196 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ADH5P11766 374 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 CSF2RAP15509 400 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 SLC26A3P40879 764 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TNFRSF4P43489 277 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ELF3P78545 371 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 CBFBQ13951 182 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 LPAL2Q16609 132 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 FAM214AQ32MH5 1076 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 CLEC17AQ6ZS10 378 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 DNAJB8Q8NHS0 232 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 SNX33Q8WV41 574 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF514Q96K75 400 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 HEPHQ9BQS7 1158 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 EPB41L4BQ9H329 900 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 LMAN1LQ9HAT1 526 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 REV1Q9UBZ9 1251 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 LIMD1Q9UGP4 676 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 RNF112Q9ULX5 631 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 FRMPD4Q14CM0 1322 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 KCNK1O00180 336 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TP53I11O14683 189 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms