RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 OPRL1P41146 370 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 RPS7P62081 194 aaKnown RBP15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 IRF8Q02556 426 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 Q6ZNX1 250 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 ADCK2Q7Z695 626 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 CACTIN-AS1Q8N1I8 211 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 TMEM209Q96SK2 561 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 MROH8Q9H579 483 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 EIF2B4Q9UI10 523 aaKnown RBP15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 CCDC88AQ3V6T2 1871 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 MATN3O15232 486 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 XPNPEP2O43895 674 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 XYLBO75191 536 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 PSIP1O75475 530 aaKnown RBP15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 AXLP30530 894 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 NNMTP40261 264 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 NKX2-5P52952 324 aaPredicted RBP15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 HUNKP57058 714 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 CSNK2BP67870 215 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 TUBA1BP68363 451 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 ELMSAN1Q6PJG2 1045 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 TUBA1AQ71U36 451 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 CMTR2Q8IYT2 770 aaKnown RBP15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 ASCC1Q8N9N2 400 aaKnown RBP15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 GPRC5AQ8NFJ5 357 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 TFAP2CQ92754 450 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 GOLGA2P5Q9HBQ8 144 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 ZNF510Q9Y2H8 683 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 CHD4Q14839 1912 aa15.81■□□□□ 0.12
CLSTN1-201ENST00000361311 AP1G1O43747 822 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 RPL10P27635 214 aaKnown RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 ZNF157P51786 506 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 SLC13A2Q13183 592 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 CDH18Q13634 790 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 VEPH1Q14D04 833 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 NFE2Q16621 373 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 RAP1GAP2Q684P5 730 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 SLC2A7Q6PXP3 512 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 HNRNPABQ99729 332 aaKnown RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 SLC25A51Q9H1U9 297 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 FBXO44Q9H4M3 255 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 TBC1D14Q9P2M4 693 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 PCDHGA7Q9Y5G6 932 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 COQ9O75208 318 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 RGS20O76081 388 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 SNX4O95219 450 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 SMIM18P0DKX4 95 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 NR2F6P10588 404 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 PAX3P23760 479 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 SLC10A2Q12908 348 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 BOP1Q14137 746 aaKnown RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 LGI2Q8N0V4 545 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 LRRC20Q8TCA0 184 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 PIH1D2Q8WWB5 315 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 C1GALT1C1Q96EU7 318 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 FZD8Q9H461 694 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 IPPKQ9H8X2 491 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 KLHL1Q9NR64 748 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 TMPRSS4Q9NRS4 437 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 FZD1Q9UP38 647 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 CFL2Q9Y281 166 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 TCAF2A6NFQ2 919 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 PCP4L1A6NKN8 68 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 C9IYK1 514 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 GNAO1P09471 354 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 PABPC1P11940 636 aaKnown RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 LPOP22079 712 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 TUFMP49411 452 aaKnown RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 BLVRAP53004 296 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 UFM1P61960 85 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 JAG1P78504 1218 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 MXD1Q05195 221 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 MBTD1Q05BQ5 628 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 ANKDD1AQ495B1 522 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 BRMS1LQ5PSV4 323 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 ZNF517Q6ZMY9 492 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 ANKRD46Q86W74 232 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 SLC2A6Q9UGQ3 507 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 EMCNQ9ULC0 261 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 ZNF490Q9ULM2 529 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 CICQ96RK0 1608 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 C7orf72A4D263 438 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 G3V2L1 256 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 GRID2O43424 1007 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 AP2A2O94973 939 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 POMCP01189 267 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 DNAJB13P59910 316 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 ABATP80404 500 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 DSC2Q02487 901 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 SULT1C3Q6IMI6 304 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 PLEKHG7Q6ZR37 379 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 MIR1-1HGQ9H1L0 117 aa15.8■□□□□ 0.12
CLSTN1-201ENST00000361311 IFI30P13284 250 aa15.79■□□□□ 0.12
CLSTN1-201ENST00000361311 HPCAL1P37235 193 aa15.79■□□□□ 0.12
CLSTN1-201ENST00000361311 KIR3DL1P43629 444 aa15.79■□□□□ 0.12
CLSTN1-201ENST00000361311 DGKQP52824 942 aa15.79■□□□□ 0.12
CLSTN1-201ENST00000361311 RAB6CQ53S08 254 aa15.79■□□□□ 0.12
CLSTN1-201ENST00000361311 SYPL2Q5VXT5 272 aa15.79■□□□□ 0.12
CLSTN1-201ENST00000361311 LILRA2Q8N149 483 aa15.79■□□□□ 0.12
CLSTN1-201ENST00000361311 OR4K2Q8NGD2 314 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms