RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 GTF2H3Q13889 308 aa17.61■□□□□ 0.41
CLK2-202ENST00000361168 DEFB133Q30KQ1 61 aa17.61■□□□□ 0.41
CLK2-202ENST00000361168 AASDHQ4L235 1098 aaPredicted RBP17.61■□□□□ 0.41
CLK2-202ENST00000361168 KANSL1Q7Z3B3 1105 aa17.61■□□□□ 0.41
CLK2-202ENST00000361168 STRA8Q7Z7C7 330 aa17.61■□□□□ 0.41
CLK2-202ENST00000361168 KIAA2013Q8IYS2 634 aa17.61■□□□□ 0.41
CLK2-202ENST00000361168 PPM1NQ8N819 430 aa17.61■□□□□ 0.41
CLK2-202ENST00000361168 ZDHHC5Q9C0B5 715 aa17.61■□□□□ 0.41
CLK2-202ENST00000361168 SPATS2LQ9NUQ6 558 aaKnown RBP17.61■□□□□ 0.41
CLK2-202ENST00000361168 BTBD3Q9Y2F9 522 aa17.61■□□□□ 0.41
CLK2-202ENST00000361168 ASPMQ8IZT6 3477 aa17.61■□□□□ 0.41
CLK2-202ENST00000361168 C4orf47A7E2U8 309 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 CFAP99D6REC4 459 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 YY2O15391 372 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 AQP9O43315 295 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 LRP3O75074 770 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 CER1O95813 267 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 PRLHRP49683 370 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 CSE1LP55060 971 aaKnown RBP17.6■□□□□ 0.41
CLK2-202ENST00000361168 SEPT7Q16181 437 aaKnown RBP17.6■□□□□ 0.41
CLK2-202ENST00000361168 INSCQ1MX18 579 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 UAP1L1Q3KQV9 507 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 LYPLAL1Q5VWZ2 237 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 IL27RAQ6UWB1 636 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 CALML6Q8TD86 181 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 PATE1Q8WXA2 126 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 TCF12Q99081 682 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 SLC30A3Q99726 388 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 ZCCHC2Q9C0B9 1178 aaKnown RBP17.6■□□□□ 0.41
CLK2-202ENST00000361168 TBC1D29Q9UFV1 150 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 ARHGEF17Q96PE2 2063 aaPredicted RBP17.6■□□□□ 0.41
CLK2-202ENST00000361168 CTIFO43310 598 aaKnown RBP17.6■□□□□ 0.41
CLK2-202ENST00000361168 TRIM16O95361 564 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 SHBGP04278 402 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 CCR7P32248 378 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 BLKP51451 505 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 TIAL1Q01085 375 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLK2-202ENST00000361168 ZNF658BQ4V348 819 aaPredicted RBP17.6■□□□□ 0.41
CLK2-202ENST00000361168 CYS1Q717R9 158 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 SPDYE1Q8NFV5 336 aaPredicted RBP17.6■□□□□ 0.41
CLK2-202ENST00000361168 GPBAR1Q8TDU6 330 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 MCMBPQ9BTE3 642 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 OSGEPL1Q9H4B0 414 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 PRDM8Q9NQV8 689 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 TRNAU1APQ9NX07 287 aaKnown RBP17.6■□□□□ 0.41
CLK2-202ENST00000361168 GPR34Q9UPC5 381 aa17.6■□□□□ 0.41
CLK2-202ENST00000361168 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.59■□□□□ 0.41
CLK2-202ENST00000361168 KMOO15229 486 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 ACTR1BP42025 376 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 ACTR1AP61163 376 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 BCL7AQ4VC05 210 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 TRMT10CQ7L0Y3 403 aaKnown RBP17.59■□□□□ 0.41
CLK2-202ENST00000361168 TAF8Q7Z7C8 310 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 UBLCP1Q8WVY7 318 aaPredicted RBP17.59■□□□□ 0.41
CLK2-202ENST00000361168 CAMK1GQ96NX5 476 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 TTC1Q99614 292 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 ACSS3Q9H6R3 686 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 RMI1Q9H9A7 625 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 INTS10Q9NVR2 710 aaKnown RBP17.59■□□□□ 0.41
CLK2-202ENST00000361168 PSMD13Q9UNM6 376 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 WDR37Q9Y2I8 494 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 TRBV23OR9-2A0A075B6M9 112 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 PRR19A6NJB7 356 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 GPR89AB7ZAQ6 455 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 TRIM38O00635 465 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 SNX2O60749 519 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 GSTA2P09210 222 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 GPR89BP0CG08 455 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 PDHA2P29803 388 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 STX2P32856 288 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 HSD17B3P37058 310 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 PREPP48147 710 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 CCT8P50990 548 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 CDKN2DP55273 166 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 PTRHD1Q6GMV3 140 aaKnown RBP17.59■□□□□ 0.41
CLK2-202ENST00000361168 CEP128Q6ZU80 1094 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 PIM3Q86V86 326 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 AMZ2Q86W34 360 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 ZC3HC1Q86WB0 502 aaKnown RBP17.59■□□□□ 0.41
CLK2-202ENST00000361168 LMNTD2Q8IXW0 634 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 CFAP206Q8IYR0 622 aa17.59■□□□□ 0.41
CLK2-202ENST00000361168 SARS2Q9NP81 518 aaKnown RBP17.59■□□□□ 0.41
CLK2-202ENST00000361168 DNAAF2Q9NVR5 837 aaKnown RBP17.59■□□□□ 0.41
CLK2-202ENST00000361168 SCHIP1Q9P0W5 487 aaPredicted RBP17.59■□□□□ 0.41
CLK2-202ENST00000361168 H3BM21 787 aa17.58■□□□□ 0.4
CLK2-202ENST00000361168 SPAG6O75602 509 aa17.58■□□□□ 0.4
CLK2-202ENST00000361168 PKMP14618 531 aaKnown RBP17.58■□□□□ 0.4
CLK2-202ENST00000361168 BRAFP15056 766 aa17.58■□□□□ 0.4
CLK2-202ENST00000361168 GCAP28676 217 aa17.58■□□□□ 0.4
CLK2-202ENST00000361168 ADARP55265 1226 aaKnown RBP17.58■□□□□ 0.4
CLK2-202ENST00000361168 ARHGAP8P85298 464 aa17.58■□□□□ 0.4
CLK2-202ENST00000361168 RNF187Q5TA31 235 aaPredicted RBP17.58■□□□□ 0.4
CLK2-202ENST00000361168 VRK3Q8IV63 474 aa17.58■□□□□ 0.4
CLK2-202ENST00000361168 FAM46DQ8NEK8 389 aa17.58■□□□□ 0.4
CLK2-202ENST00000361168 MYRIPQ8NFW9 859 aa17.58■□□□□ 0.4
CLK2-202ENST00000361168 GIMAP7Q8NHV1 300 aa17.58■□□□□ 0.4
CLK2-202ENST00000361168 HEXDCQ8WVB3 486 aa17.58■□□□□ 0.4
CLK2-202ENST00000361168 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.58■□□□□ 0.48e-8■■■□□ 17.7
CLK2-202ENST00000361168 FUT8Q9BYC5 575 aa17.58■□□□□ 0.4
CLK2-202ENST00000361168 TMEM9BQ9NQ34 198 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms