RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 CDKN1CP49918 316 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 PTPN5P54829 565 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 RAB10P61026 200 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 CACNG1Q06432 222 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 DYNC1I2Q13409 638 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 TYSND1Q2T9J0 566 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 OGFRL1Q5TC84 451 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 CRTC1Q6UUV9 634 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 SNX32Q86XE0 403 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 PQLC1Q8N2U9 271 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 LRGUKQ96M69 825 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 P2RY13Q9BPV8 354 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 C1QTNF1Q9BXJ1 281 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 CCDC68Q9H2F9 335 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 WDR55Q9H6Y2 383 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 EFCAB1Q9HAE3 211 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 VCX3AQ9NNX9 186 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 CRYL1Q9Y2S2 319 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 PLXNB3Q9ULL4 1909 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 TSPAN11A1L157 253 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 EME2A4GXA9 379 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 TRPC5OSA6NMA1 111 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 H3BNX3 289 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 NEMP1O14524 444 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 NPC1O15118 1278 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 MAP3K13O43283 966 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 CHRNGP07510 517 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 CTHP32929 405 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 WASP42768 502 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 TNFRSF4P43489 277 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 CLCN2P51788 898 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 NAGLUP54802 743 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 AQP4P55087 323 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 ART3Q13508 389 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 PEX6Q13608 980 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 ZDHHC20Q5W0Z9 365 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 LRRC66Q68CR7 880 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 FAM45BPQ6NSW5 357 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 TAS2R42Q7RTR8 314 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 DSELQ8IZU8 1212 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 PGAM4Q8N0Y7 254 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 CBARPQ8N350 705 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 TMIEQ8NEW7 156 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 FAM45AQ8TCE6 357 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 DLG3Q92796 817 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 PPP1R16AQ96I34 528 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 CDRT15Q96T59 188 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 FAM129BQ96TA1 746 aa13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 PHF7Q9BWX1 381 aaPredicted RBP13.01□□□□□ -0.33
SQSTM1-201ENST00000360718 UBA6A0AVT1 1052 aaPredicted RBP13□□□□□ -0.33
SQSTM1-201ENST00000360718 KLHL33A6NCF5 533 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 GOLGA8CPA6NN73 597 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 C16orf96A6NNT2 1141 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 TXNDC9O14530 226 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 GAPDHSO14556 408 aaPredicted RBP13□□□□□ -0.33
SQSTM1-201ENST00000360718 GRID2O43424 1007 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 EPHX1P07099 455 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 ZNF30P17039 623 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 ITGALP20701 1170 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 EPHA3P29320 983 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 VIPR1P32241 457 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 CA5AP35218 305 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 SPAM1P38567 509 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 CHN2P52757 468 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 SEC13P55735 322 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 FLOT2Q14254 428 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 PDK3Q15120 406 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 NXNQ6DKJ4 435 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 LRRC8EQ6NSJ5 796 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 ERAP2Q6P179 960 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 RFLNAQ6ZTI6 216 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 DEFB123Q8N688 67 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 HLA-CQ95604 372 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 SPATA16Q9BXB7 569 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 MRPL40Q9NQ50 206 aaKnown RBP13□□□□□ -0.33
SQSTM1-201ENST00000360718 DYRK4Q9NR20 520 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 B4GALT6Q9UBX8 382 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 VWA7Q9Y334 891 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 SHISA7A6NL88 538 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 TK2O00142 265 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 PLK4O00444 970 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 AP1G1O43747 822 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 NPHS1O60500 1241 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 SRP72O76094 671 aaKnown RBP13□□□□□ -0.33
SQSTM1-201ENST00000360718 PRAMEF1O95521 474 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 TIMP2P16035 220 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 KIR2DL1P43626 348 aaPredicted RBP13□□□□□ -0.33
SQSTM1-201ENST00000360718 TAS2R39P59534 338 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 TFF2Q03403 129 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 FOLH1Q04609 750 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 SMAD2Q15796 467 aaKnown RBP13□□□□□ -0.33
SQSTM1-201ENST00000360718 FAM151BQ6UXP7 276 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 CERS6Q6ZMG9 384 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 PIANPQ8IYJ0 282 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 CHPFQ8IZ52 775 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 FSTL5Q8N475 847 aaPredicted RBP13□□□□□ -0.33
SQSTM1-201ENST00000360718 TMEM151AQ8N4L1 468 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 AFAP1L2Q8N4X5 818 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
SQSTM1-201ENST00000360718 KCTD4Q8WVF5 259 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms