RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 C11orf24Q96F05 449 aaPredicted RBP9.59□□□□□ -0.87
CUX1-203ENST00000360264 HMGN1P05114 100 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 PITPNAQ00169 270 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 ZACNQ401N2 412 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 THAP5Q7Z6K1 395 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 ZZZ3Q8IYH5 903 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 BAP1Q92560 729 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 MFSD14AQ96MC6 490 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 GBA3Q9H227 469 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 PIGBOS1A0A0B4J2F0 54 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 MTHFRP42898 656 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 POLR3HQ9Y535 204 aaPredicted RBP9.59□□□□□ -0.87
CUX1-203ENST00000360264 TNFRSF11BO00300 401 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 GSC2O15499 205 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 CDH3P22223 829 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 HCAR3P49019 387 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 ELF3P78545 371 aaPredicted RBP9.59□□□□□ -0.87
CUX1-203ENST00000360264 GAD2Q05329 585 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 ZNF567Q8N184 647 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 RC3H2Q9HBD1 1191 aaKnown RBP9.59□□□□□ -0.87
CUX1-203ENST00000360264 PCDHB16Q9NRJ7 776 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 CCNE2O96020 404 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 SLC1A2P43004 574 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 ADCY4Q8NFM4 1077 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 DHX33Q9H6R0 707 aaKnown RBP9.59□□□□□ -0.87
CUX1-203ENST00000360264 RAI2Q9Y5P3 530 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 A0A0J9YVX5 310 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 TRIM64A6NGJ6 449 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 INSIG1O15503 277 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 LYPLA2O95372 231 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 MTHFD1P11586 935 aaKnown RBP9.59□□□□□ -0.87
CUX1-203ENST00000360264 AGXTP21549 392 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 NDUFS1P28331 727 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 NAE1Q13564 534 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 ZFPM1Q8IX07 1006 aa9.59□□□□□ -0.87
CUX1-203ENST00000360264 EIF2B3Q9NR50 452 aaKnown RBP9.59□□□□□ -0.87
CUX1-203ENST00000360264 CTPS1P17812 591 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 SP2Q02086 613 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 GTF2H2Q13888 395 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 NTRK3Q16288 839 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 GTF2H2CQ6P1K8 395 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 FOXR1Q6PIV2 292 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 AKAP14Q86UN6 197 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 PNLDC1Q8NA58 520 aaKnown RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 KCNMB3Q9NPA1 279 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 PCDHGA3Q9Y5H0 932 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 CALCAP01258 141 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 SLC6A9P48067 706 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 DPY19L1Q2PZI1 675 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 HDDC3Q8N4P3 179 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 OR4K2Q8NGD2 314 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 ZNF514Q96K75 400 aaPredicted RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 GPR88Q9GZN0 384 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 SLC25A51Q9H1U9 297 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 FAM105AQ9NUU6 356 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 ADGRE2Q9UHX3 823 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 GRIP1Q9Y3R0 1128 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 AGLP35573 1532 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 ANXA2P2A6NMY6 339 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 MEIS2O14770 477 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 ORC5O43913 435 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 ANXA2P07355 339 aaKnown RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 ACVR2AP27037 513 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 PBX3P40426 434 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 COLEC12Q5KU26 742 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 CXCL17Q6UXB2 119 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 JSRP1Q96MG2 331 aaPredicted RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 ZSWIM3Q96MP5 696 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 NOX1Q9Y5S8 564 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 A0A1B0GVC2 190 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 PSMD10O75832 226 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 HNRNPLP14866 589 aaKnown RBP eCLIP9.58□□□□□ -0.886e-8■■■■■ 28.9
CUX1-203ENST00000360264 GOT1P17174 413 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 TMEM17Q86X19 198 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 FAM83DQ9H4H8 585 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 TRMT13Q9NUP7 481 aaKnown RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 MATN4O95460 622 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 ESR1P03372 595 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 BST1Q10588 318 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 CBX3Q13185 183 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 ANKS1BQ7Z6G8 1248 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 KIAA0319LQ8IZA0 1049 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 AKAP1Q92667 903 aaKnown RBP eCLIP9.58□□□□□ -0.881e-6■■■■□ 21.5
CUX1-203ENST00000360264 RNASEH2AO75792 299 aaKnown RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 METTL18O95568 372 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 PLGP00747 810 aaPredicted RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 DBTP11182 482 aaKnown RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 ALKBH2Q6NS38 261 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 LAPTM4BQ86VI4 370 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 NRSN1Q8IZ57 195 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 C1orf216Q8TAB5 229 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 PNPT1Q8TCS8 783 aaKnown RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 RGS17Q9UGC6 210 aaPredicted RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 TCRBV9S1A1TA0A576 114 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 ITGA7Q13683 1181 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 CXorf57Q6NSI4 855 aaKnown RBP9.58□□□□□ -0.88
CUX1-203ENST00000360264 TESCQ96BS2 214 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 ZNF639Q9UID6 485 aa9.58□□□□□ -0.88
CUX1-203ENST00000360264 PAGE1O75459 146 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms