RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 RECQL5O94762 991 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 PRKD3O94806 890 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 OGNP20774 298 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 DGKAP23743 735 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 DNAJB1P25685 340 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 PBLDP30039 288 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 ALDH7A1P49419 539 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 ST13P50502 369 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 KPNA1P52294 538 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 INHBCP55103 352 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 MYBPC3Q14896 1274 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 PAGE3Q5JUK9 113 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ATXN7L2Q5T6C5 722 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 TPGS1Q6ZTW0 290 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 LARP4Q71RC2 724 aaKnown RBP eCLIP6.75□□□□□ -1.33
RTN4-203ENST00000357376 NECAB2Q7Z6G3 386 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ZNF467Q7Z7K2 595 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 SYVN1Q86TM6 617 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 C11orf74Q86VG3 221 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 SYT12Q8IV01 421 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 STK40Q8N2I9 435 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 LIX1Q8N485 282 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 PACRGLQ8N7B6 248 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 OR52B6Q8NGF0 335 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 OR13J1Q8NGT2 312 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 FAM110BQ8TC76 370 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 SLC13A3Q8WWT9 602 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 GAB3Q8WWW8 586 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ISL2Q96A47 359 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 KIAA1191Q96A73 305 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 CGREF1Q99674 301 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 NOL6Q9H6R4 1146 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 MRM3Q9HC36 420 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 CD320Q9NPF0 282 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 TREX1Q9NSU2 369 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 TRMT13Q9NUP7 481 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 TMEM181Q9P2C4 612 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 USP22Q9UPT9 525 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 RBMX2Q9Y388 322 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 FAM32AQ9Y421 112 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 ZNF831Q5JPB2 1677 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 LY75O60449 1722 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 NRXN2Q9P2S2 1712 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 LTBP3Q9NS15 1303 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ZNFX1Q9P2E3 1918 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 TBKBP1A7MCY6 615 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 hCG_2039718K7EN88 272 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 UBFD1O14562 309 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 RFXANKO14593 260 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ZSCAN9O15535 394 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 SEC24AO95486 1093 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 PRAMEF1O95521 474 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ANGPTL1O95841 491 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 PENKP01210 267 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 APOA1P02647 267 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ASGR1P07306 291 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 RAP2AP10114 183 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 MYCLP1P12525 358 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 RPL17P18621 184 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 MZF1P28698 734 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 GNPDA1P46926 289 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 CDKN1CP49918 316 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 BCL2L1Q07817 233 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 SEMA3BQ13214 749 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 PTGR1Q14914 329 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 TRIP4Q15650 581 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 DGUOKQ16854 277 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 DENND5AQ6IQ26 1287 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ZNF598Q86UK7 904 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 SYTL1Q8IYJ3 562 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 TTC9BQ8N6N2 239 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ANKFN1Q8N957 763 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 SETD9Q8NE22 299 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ZUFSPQ96AP4 578 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 PGAP3Q96FM1 320 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 AURKBQ96GD4 344 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 APOLD1Q96LR9 279 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 UROC1Q96N76 676 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 NODALQ96S42 347 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ANKRD60Q9BZ19 345 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 ZNF556Q9HAH1 456 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 LRTM1Q9HBL6 345 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 SLAMF8Q9P0V8 285 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 SCHIP1Q9P0W5 487 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.75□□□□□ -1.332e-13■□□□□ 9.4
RTN4-203ENST00000357376 FCF1Q9Y324 198 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 SAMHD1Q9Y3Z3 626 aaKnown RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 MAGED1Q9Y5V3 778 aaPredicted RBP6.75□□□□□ -1.33
RTN4-203ENST00000357376 SCN1AP35498 2009 aa6.75□□□□□ -1.33
RTN4-203ENST00000357376 A0A1W2PQ67 120 aa6.74□□□□□ -1.33
RTN4-203ENST00000357376 TMEM247A6NEH6 219 aa6.74□□□□□ -1.33
RTN4-203ENST00000357376 BCKDKO14874 412 aa6.74□□□□□ -1.33
RTN4-203ENST00000357376 TBL1XO60907 577 aa6.74□□□□□ -1.33
RTN4-203ENST00000357376 DIRAS1O95057 198 aa6.74□□□□□ -1.33
RTN4-203ENST00000357376 DBTP11182 482 aaKnown RBP6.74□□□□□ -1.33
RTN4-203ENST00000357376 GPX3P22352 226 aa6.74□□□□□ -1.33
RTN4-203ENST00000357376 FMO3P31513 532 aa6.74□□□□□ -1.33
RTN4-203ENST00000357376 RFC2P35250 354 aa6.74□□□□□ -1.33
RTN4-203ENST00000357376 PRIM2P49643 509 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms