RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 DCAKDQ8WVC6 231 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 HIPK3Q9H422 1215 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 TOR4AQ9NXH8 423 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 TLL2Q9Y6L7 1015 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 MYH13Q9UKX3 1938 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 A0A0G2JLL6 359 aaPredicted RBP11.63□□□□□ -0.55
COL9A1-202ENST00000357250 SMPD1P17405 629 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 PSMA1P25786 263 aaKnown RBP11.63□□□□□ -0.55
COL9A1-202ENST00000357250 PPM1JQ5JR12 505 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 PRRT2Q7Z6L0 340 aaPredicted RBP11.63□□□□□ -0.55
COL9A1-202ENST00000357250 TMEM110Q86TL2 294 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 KCTD13Q8WZ19 329 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 FCGR1BQ92637 280 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 CIB1Q99828 191 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 COLEC10Q9Y6Z7 277 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 DHFRP00374 187 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 APODP05090 189 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 CD48P09326 243 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 TCF4P15884 667 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 MPP1Q00013 466 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 CCL14Q16627 93 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 NDUFA9Q16795 377 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 C9orf64Q5T6V5 341 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 LPCAT4Q643R3 524 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 CFAP52Q8N1V2 620 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 SLC38A4Q969I6 547 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 GORASP1Q9BQQ3 440 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 NECTIN3Q9NQS3 549 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 C1orf109Q9NX04 203 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 CNTN3Q9P232 1028 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 ASB3Q9Y575 518 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 PCDHGA4Q9Y5G9 962 aa11.63□□□□□ -0.55
COL9A1-202ENST00000357250 H0Y858 1186 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 SEPT4O43236 478 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 UGT2B4P06133 528 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 ANXA4P09525 319 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 CLCNKBP51801 687 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 TCEAL1Q15170 157 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 ESRP1Q6NXG1 681 aaKnown RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 PACRGLQ8N7B6 248 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 TOP1MTQ969P6 601 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 LPIN3Q9BQK8 851 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 CHID1Q9BWS9 393 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 CADM1Q9BY67 442 aaKnown RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 YTHDF1Q9BYJ9 559 aaKnown RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 TMEM27Q9HBJ8 222 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 CCDC177Q9NQR7 707 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 ING3Q9NXR8 418 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 PDP1Q9P0J1 537 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 NFKBIL1Q9UBC1 381 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 HOXD13P35453 343 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 CCNFP41002 786 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 CHST15Q7LFX5 561 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 TMPRSS11BQ86T26 416 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 ACDQ96AP0 544 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 TEPSINQ96N21 525 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 IL1RAPQ9NPH3 570 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 THUMPD1Q9NXG2 353 aaKnown RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 EVLQ9UI08 416 aaPredicted RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 FAM234BA2RU67 622 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 FOXO6A8MYZ6 492 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 TAF4O00268 1085 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 TULP2O00295 520 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 TNFRSF11BO00300 401 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 ANGPTL1O95841 491 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 GOT2P00505 430 aaKnown RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 HSD17B2P37059 387 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 HEPACAMQ14CZ8 416 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 VPS26BQ4G0F5 336 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 ZNF781Q8N8C0 355 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 MAB21L3Q8N8X9 362 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 RFKQ969G6 155 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 SPACA7Q96KW9 195 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 ZNF347Q96SE7 839 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 COQ7Q99807 217 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 FBXL21Q9UKT6 434 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 OGDHLQ9ULD0 1010 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 TLR6Q9Y2C9 796 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 MAN2B2Q9Y2E5 1009 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 ARL5CA6NH57 179 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 ZNF487B1APH4 448 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 NEDD8-MDP1E9PL57 170 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 IRAK2O43187 625 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 VNN1O95497 513 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 SRPRAP08240 638 aaKnown RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 NMBRP28336 390 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 EEFSECP57772 596 aaKnown RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 TAS2R39P59534 338 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 EML3Q32P44 896 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 SPATS1Q496A3 300 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 CRTC3Q6UUV7 619 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 SLCO6A1Q86UG4 719 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 KIFC1Q9BW19 673 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 GTF2IRD1Q9UHL9 959 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 WBP11Q9Y2W2 641 aaKnown RBP11.62□□□□□ -0.55
COL9A1-202ENST00000357250 COQ6Q9Y2Z9 468 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 Q9Y3F1 56 aa11.62□□□□□ -0.55
COL9A1-202ENST00000357250 LGR5O75473 907 aa11.61□□□□□ -0.55
COL9A1-202ENST00000357250 OR4Q2P0C623 313 aa11.61□□□□□ -0.55
COL9A1-202ENST00000357250 RHAGQ02094 409 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms