RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 FAM118AQ9NWS6 357 aa13.46□□□□□ -0.25
TRIM4-203ENST00000355947 RBPJLQ9UBG7 517 aa13.46□□□□□ -0.25
TRIM4-203ENST00000355947 CDH7Q9ULB5 785 aa13.46□□□□□ -0.25
TRIM4-203ENST00000355947 ASB1Q9Y576 335 aa13.46□□□□□ -0.25
TRIM4-203ENST00000355947 TFECO14948 347 aaPredicted RBP13.46□□□□□ -0.26
TRIM4-203ENST00000355947 MYL3P08590 195 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 CD1DP15813 335 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 GDF5P43026 501 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 SERPINB10P48595 397 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 NEK2P51955 445 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 CASP9P55211 416 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 BEX3Q00994 111 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 TP53BP2Q13625 1128 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 DGUOKQ16854 277 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 FAM174BQ3ZCQ3 159 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 SIRPB2Q5JXA9 342 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 DCLRE1AQ6PJP8 1040 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 CCDC80Q76M96 950 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 SPRED1Q7Z699 444 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 PRKD2Q9BZL6 878 aa13.46□□□□□ -0.26
TRIM4-203ENST00000355947 PIRO00625 290 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 BCKDKO14874 412 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 TREHO43280 583 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 USP2O75604 605 aaPredicted RBP13.45□□□□□ -0.26
TRIM4-203ENST00000355947 UGT2B4P06133 528 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 AQP1P29972 269 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 SEMA3AQ14563 771 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 AP5B1Q2VPB7 878 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 CATSPEREQ5SY80 951 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 UBE2UQ5VVX9 321 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 RAP1GAP2Q684P5 730 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 XAF1Q6GPH4 301 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 P2RY8Q86VZ1 359 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 ARHGAP12Q8IWW6 846 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 UBE2J2Q8N2K1 259 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 CHDHQ8NE62 594 aaPredicted RBP13.45□□□□□ -0.26
TRIM4-203ENST00000355947 MROH8Q9H579 483 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 BOLA1Q9Y3E2 137 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 PCDHA9Q9Y5H5 950 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 ZNF99A8MXY4 864 aaPredicted RBP13.45□□□□□ -0.26
TRIM4-203ENST00000355947 TAF4O00268 1085 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 PFDN6O15212 129 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 RAD51BO15315 384 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 RGS5O15539 181 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 B3GALT4O96024 378 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 PNPLA4P41247 253 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 FAM189BP81408 668 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 RAD51Q06609 339 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 RAPSNQ13702 412 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 NPTX1Q15818 432 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 OR2T11Q8NH01 316 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 STON2Q8WXE9 905 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 STARD8Q92502 1023 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 SLC2A13Q96QE2 648 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 TRMOQ9BU70 441 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 AMBRA1Q9C0C7 1298 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 CARS2Q9HA77 564 aaKnown RBP13.45□□□□□ -0.26
TRIM4-203ENST00000355947 CNGB3Q9NQW8 809 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 SDR39U1Q9NRG7 319 aaPredicted RBP13.45□□□□□ -0.26
TRIM4-203ENST00000355947 ZNF451Q9Y4E5 1061 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 ASNA1O43681 348 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 OR1I1O60431 355 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 DNTTP04053 509 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 LCKP06239 509 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 CCNCP24863 283 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 AZGP1P25311 298 aaKnown RBP13.45□□□□□ -0.26
TRIM4-203ENST00000355947 NUDT6P53370 316 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 FAM187BQ17R55 369 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 ZNF549Q6P9A3 640 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 RANBP10Q6VN20 620 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 SLC22A15Q8IZD6 547 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 EID3Q8N140 333 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 OR4K2Q8NGD2 314 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 MAGED4Q96JG8 741 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 ZBTB18Q99592 522 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 LRRC3Q9BY71 257 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 TRIM54Q9BYV2 358 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 MAGEE1Q9HCI5 957 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 EXOSC4Q9NPD3 245 aaKnown RBP13.45□□□□□ -0.26
TRIM4-203ENST00000355947 CATSPERZQ9NTU4 200 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 IKZF3Q9UKT9 509 aa13.45□□□□□ -0.26
TRIM4-203ENST00000355947 LOC100130705A0A1B0GUX0 176 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 ASPDHA6ND91 283 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 E9PAM4 449 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 F8W810 466 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 SLC1A7O00341 560 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 TNPO2O14787 897 aaKnown RBP13.44□□□□□ -0.26
TRIM4-203ENST00000355947 BNIP3LO60238 219 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 KRT8P05787 483 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 SKIV2LQ15477 1246 aaKnown RBP13.44□□□□□ -0.26
TRIM4-203ENST00000355947 ADPRMQ3LIE5 342 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 SOWAHCQ53LP3 525 aaPredicted RBP13.44□□□□□ -0.26
TRIM4-203ENST00000355947 ALFQ53S48 1182 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
TRIM4-203ENST00000355947 SMYD5Q6GMV2 418 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 GPRIN3Q6ZVF9 776 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 AKAP14Q86UN6 197 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 APOBEC3FQ8IUX4 373 aaKnown RBP13.44□□□□□ -0.26
TRIM4-203ENST00000355947 STAG3L4Q8TBR4 150 aa13.44□□□□□ -0.26
TRIM4-203ENST00000355947 LINGO1Q96FE5 620 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms