RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 HIC2Q96JB3 615 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 TEKT5Q96M29 485 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 GDAP1L1Q96MZ0 367 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 IL12RB2Q99665 862 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 FAM118BQ9BPY3 351 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 BBS2Q9BXC9 721 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 TEX15Q9BXT5 2789 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 TRIM4Q9C037 500 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 NACA2Q9H009 215 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 MAGEH1Q9H213 219 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 PIEZO2Q9H5I5 2752 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 C6orf106Q9H6K1 298 aaPredicted RBP6.97□□□□□ -1.29
VPS13A-201ENST00000355766 LRRC40Q9H9A6 602 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 TMBIM4Q9HC24 238 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 NINJ2Q9NZG7 142 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 COX16Q9P0S2 106 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 ZNF212Q9UDV6 495 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 IL17BQ9UHF5 180 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 SFMBT1Q9UHJ3 866 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 XPO7Q9UIA9 1087 aaKnown RBP6.97□□□□□ -1.29
VPS13A-201ENST00000355766 AAR2Q9Y312 384 aaKnown RBP6.97□□□□□ -1.29
VPS13A-201ENST00000355766 CHD5Q8TDI0 1954 aa6.97□□□□□ -1.29
VPS13A-201ENST00000355766 A0A1B0GVM2 712 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 SLC12A8A0AV02 714 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 MAGEB16A2A368 324 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 TYW5A2RUC4 315 aaKnown RBP6.96□□□□□ -1.3
VPS13A-201ENST00000355766 H3BQF6 201 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 RASGRF2O14827 1237 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 ACSL4O60488 711 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 SYNCRIPO60506 623 aaKnown RBP6.96□□□□□ -1.3
VPS13A-201ENST00000355766 RAMP2O60895 175 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 AP2A1O95782 977 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 APRTP07741 180 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 CISD3P0C7P0 127 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 MSL3P1P0C860 447 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 ZSCAN5DPP0CG00 497 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 CHKAP35790 457 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 MMP13P45452 471 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 RENBPP51606 427 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 SLC18A1P54219 525 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 CDH4P55283 916 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 AP1B1Q10567 949 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 ILKQ13418 452 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 PRPSAP1Q14558 356 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 KRT71Q3SY84 523 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 STEAP4Q687X5 459 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 KCTD11Q693B1 232 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 NAPEPLDQ6IQ20 393 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 RWDD4Q6NW29 188 aaKnown RBP6.96□□□□□ -1.3
VPS13A-201ENST00000355766 FBXL22Q6P050 247 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 LRRC8BQ6P9F7 803 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 KDM7AQ6ZMT4 941 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 TPGS1Q6ZTW0 290 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 FAM124AQ86V42 546 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 ARHGAP12Q8IWW6 846 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 CPXM2Q8N436 756 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 TEX26Q8N6G2 289 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 DCBLD1Q8N8Z6 715 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 CCNYQ8ND76 341 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 PYROXD1Q8WU10 500 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 NSMCE1Q8WV22 266 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 PEX13Q92968 403 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 TLCD1Q96CP7 247 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 NAF1Q96HR8 494 aaKnown RBP6.96□□□□□ -1.3
VPS13A-201ENST00000355766 ZNF578Q96N58 590 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-201ENST00000355766 PWWP2AQ96N64 755 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 FCRL5Q96RD9 977 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 CYTH2Q99418 400 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 ELF4Q99607 663 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-201ENST00000355766 CCSER2Q9H7U1 834 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 SAYSD1Q9NPB0 183 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 EURLQ9NYK6 297 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 KLHL8Q9P2G9 620 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-201ENST00000355766 THAP10Q9P2Z0 257 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-201ENST00000355766 LSM7Q9UK45 103 aaKnown RBP6.96□□□□□ -1.3
VPS13A-201ENST00000355766 CLCA2Q9UQC9 943 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 HEMK1Q9Y5R4 338 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-201ENST00000355766 TEX264Q9Y6I9 313 aa6.96□□□□□ -1.3
VPS13A-201ENST00000355766 ILVBLA1L0T0 632 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 SDR42E2A6NKP2 422 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 VILLO15195 856 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 RGS16O15492 202 aaPredicted RBP6.95□□□□□ -1.3
VPS13A-201ENST00000355766 YKT6O15498 198 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 MAFKO60675 156 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 STC2O76061 302 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 SEMA4FO95754 770 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 EPOP01588 193 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 CCNB1P14635 433 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 ETS1P14921 441 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 TACR2P21452 398 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 PRKCHP24723 683 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 CNTFP26441 200 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 CD27P26842 260 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 EPHA8P29322 1005 aaPredicted RBP6.95□□□□□ -1.3
VPS13A-201ENST00000355766 ACSL1P33121 698 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 PGFP49763 221 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 C21orf59P57076 290 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 GEMIN4P57678 1058 aaKnown RBP6.95□□□□□ -1.3
VPS13A-201ENST00000355766 IL10RBQ08334 325 aa6.95□□□□□ -1.3
VPS13A-201ENST00000355766 PDIA2Q13087 525 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms