RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 HOXB8P17481 243 aaPredicted RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 ITPKAP23677 461 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 MC5RP33032 325 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 SLC9A3P48764 834 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 PCYT1AP49585 367 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 NUP107P57740 925 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 PRKCQQ04759 706 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 TCTN1Q2MV58 587 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 SETMARQ53H47 684 aaPredicted RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 COL13A1Q5TAT6 717 aaPredicted RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 LIPMQ5VYY2 423 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 AAGABQ6PD74 315 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 SLC36A4Q6YBV0 504 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 LRRC6Q86X45 466 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 ZNF611Q8N823 705 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 RNF166Q96A37 237 aaPredicted RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 DGCR14Q96DF8 476 aaKnown RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 ECSITQ9BQ95 431 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 SYNPO2LQ9H987 977 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 ZBTB26Q9HCK0 441 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 MRPL47Q9HD33 250 aaKnown RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 SAGE1Q9NXZ1 904 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 MALT1Q9UDY8 824 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 ALG6Q9Y672 507 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 COPEO14579 308 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 EPHB6O15197 1021 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 TULP3O75386 442 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 SCGNO76038 276 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 ZBTB7AO95365 584 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 PLATP00750 562 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 G6PDP11413 515 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 IL4RP24394 825 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 MAGEA4P43358 317 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 MXI1P50539 228 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 TROAPQ12815 778 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 MAD2L1Q13257 205 aaPredicted RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 SP140Q13342 867 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 ALCAMQ13740 583 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 ERV3-1Q14264 604 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 LARS2Q15031 903 aaKnown RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 C15orf59Q2T9L4 293 aaPredicted RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 ASTE1Q2TB18 679 aaPredicted RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 MAJINQ3KP22 176 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 SLC51BQ86UW2 128 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 OR10H5Q8NGA6 315 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 PYROXD1Q8WU10 500 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 TSACCQ96A04 125 aaPredicted RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 THOC3Q96J01 351 aaKnown RBP5.92□□□□□ -1.46
RFC1-201ENST00000349703 FCRL4Q96PJ5 515 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 KCNK16Q96T55 309 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 PDCD2LQ9BRP1 358 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 KATNB1Q9BVA0 655 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 TTLL2Q9BWV7 592 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 NEUROG2Q9H2A3 272 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 DNAJB4Q9UDY4 337 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 KLQ9UEF7 1012 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 CARD8Q9Y2G2 431 aa5.92□□□□□ -1.46
RFC1-201ENST00000349703 UBE4BO95155 1302 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 MROH7Q68CQ1 1323 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 ISPDA4D126 451 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 WDR91A4D1P6 747 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 URADA6NGE7 173 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 CAPN14A8MX76 684 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 H7BY64 318 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 GH1P01241 217 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 ABCD3P28288 659 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 PFKPQ01813 784 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 EFTUD2Q15029 972 aaKnown RBP eCLIP5.91□□□□□ -1.462e-11■■■■■ 78.5
RFC1-201ENST00000349703 TRIP13Q15645 432 aaPredicted RBP5.91□□□□□ -1.46
RFC1-201ENST00000349703 SHROOM1Q2M3G4 852 aaPredicted RBP5.91□□□□□ -1.46
RFC1-201ENST00000349703 TMEM35AQ53FP2 167 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 TEDDM1Q5T9Z0 273 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 AFMIDQ63HM1 303 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 FSTL4Q6MZW2 842 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 TAF2Q6P1X5 1199 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 LCTLQ6UWM7 567 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 NALCNQ8IZF0 1738 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 NAT14Q8WUY8 206 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 TAAR9Q96RI9 348 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 RBM15Q96T37 977 aaKnown RBP eCLIP5.91□□□□□ -1.464e-6■□□□□ 8.3
RFC1-201ENST00000349703 KCNS3Q9BQ31 491 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 MRPS26Q9BYN8 205 aaKnown RBP5.91□□□□□ -1.46
RFC1-201ENST00000349703 POLR1EQ9GZS1 481 aaKnown RBP5.91□□□□□ -1.46
RFC1-201ENST00000349703 SYTL2Q9HCH5 934 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 PCDH18Q9HCL0 1135 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 ASNSD1Q9NWL6 643 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 A0A1W2PPM1 405 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 SUPT3HB4E1H0 165 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 EI24O14681 340 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 ZNF197O14709 1029 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 NKRFO15226 690 aaKnown RBP eCLIP5.91□□□□□ -1.46
RFC1-201ENST00000349703 SULT1B1O43704 296 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 B4GALT4O60513 344 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 LILRA1O75019 489 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 TNFAIP8O95379 198 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 CYP1A2P05177 515 aa5.91□□□□□ -1.46
RFC1-201ENST00000349703 EIF2S1P05198 315 aaKnown RBP5.91□□□□□ -1.46
RFC1-201ENST00000349703 LPOP22079 712 aaPredicted RBP5.91□□□□□ -1.46
RFC1-201ENST00000349703 RPL5P46777 297 aaKnown RBP5.91□□□□□ -1.46
RFC1-201ENST00000349703 NDUFV1P49821 464 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms