RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CD1CP29017 333 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 CCKBRP32239 447 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 ETF1P62495 437 aaKnown RBP21.69■■□□□ 1.06
SNX3-202ENST00000349379 SARNPP82979 210 aaKnown RBP21.69■■□□□ 1.06
SNX3-202ENST00000349379 ZFP36L1Q07352 338 aaKnown RBP21.69■■□□□ 1.06
SNX3-202ENST00000349379 BIRC2Q13490 618 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 NFE2L1Q14494 772 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 ZNF658BQ4V348 819 aaPredicted RBP21.69■■□□□ 1.06
SNX3-202ENST00000349379 METRNLQ641Q3 311 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 PACS1Q6VY07 963 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 TMPRSS9Q7Z410 1059 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 B3GNT8Q7Z7M8 397 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 NAT8LQ8N9F0 302 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 OR2L2Q8NH16 312 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 MDM1Q8TC05 714 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 SH3KBP1Q96B97 665 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 STN1Q9H668 368 aaKnown RBP21.69■■□□□ 1.06
SNX3-202ENST00000349379 CCDC86Q9H6F5 360 aaKnown RBP21.69■■□□□ 1.06
SNX3-202ENST00000349379 UCK1Q9HA47 277 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 SYBUQ9NX95 663 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 WDR37Q9Y2I8 494 aa21.69■■□□□ 1.06
SNX3-202ENST00000349379 A0A1W2PNU3 283 aaPredicted RBP21.68■■□□□ 1.06
SNX3-202ENST00000349379 PDZK1P1A8MUH7 402 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 ZW10O43264 779 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 ALDH4A1P30038 563 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 MAGEA3P43357 314 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 TERF1P54274 439 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 DRG2P55039 364 aaKnown RBP21.68■■□□□ 1.06
SNX3-202ENST00000349379 GPLD1P80108 840 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 PTK6Q13882 451 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 CLCA4Q14CN2 919 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 SEPT7Q16181 437 aaKnown RBP21.68■■□□□ 1.06
SNX3-202ENST00000349379 TAS2R42Q7RTR8 314 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 ZNF761Q86XN6 746 aaPredicted RBP21.68■■□□□ 1.06
SNX3-202ENST00000349379 SLITRK4Q8IW52 837 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 OR4L1Q8NH43 312 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 ZCCHC14Q8WYQ9 949 aaKnown RBP21.68■■□□□ 1.06
SNX3-202ENST00000349379 ATXN7L3BQ96GX2 97 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 LIN37Q96GY3 246 aaPredicted RBP21.68■■□□□ 1.06
SNX3-202ENST00000349379 TMEM74Q96NL1 305 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 SLC38A3Q99624 504 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 POT1Q9NUX5 634 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 SOX13Q9UN79 622 aa21.68■■□□□ 1.06
SNX3-202ENST00000349379 C17orf113A0A1B0GUU1 675 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 LILRA5A6NI73 299 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 CCDC188H7C350 402 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 NMBRP28336 390 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 NSG1P42857 185 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 EPHA4P54764 986 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 INHBCP55103 352 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 PRAMEP78395 509 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 CFHR1Q03591 330 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 CYP4F3Q08477 520 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 RNASEH2BQ5TBB1 312 aaKnown RBP21.67■■□□□ 1.06
SNX3-202ENST00000349379 LYPLAL1Q5VWZ2 237 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 CERS6Q6ZMG9 384 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 HM13Q8TCT9 377 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.67■■□□□ 1.066e-11■■■■□ 23.5
SNX3-202ENST00000349379 SERPINB12Q96P63 405 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 XAB2Q9HCS7 855 aaKnown RBP21.67■■□□□ 1.06
SNX3-202ENST00000349379 KCNK4Q9NYG8 393 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 USP24Q9UPU5 2620 aa21.67■■□□□ 1.06
SNX3-202ENST00000349379 TMX2-CTNND1H3BSU7 103 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 TAF4O00268 1085 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 AVILO75366 819 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 AP2A2O94973 939 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 IVDP26440 423 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 ARNTP27540 789 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 PBLDP30039 288 aaPredicted RBP21.66■■□□□ 1.06
SNX3-202ENST00000349379 CSF2RBP32927 897 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 PAFAH1B1P43034 410 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 LSSP48449 732 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 SEMA3AQ14563 771 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 PPP1R7Q15435 360 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 AMZ1Q400G9 498 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 IGF2-ASQ6U949 168 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 ZNF574Q6ZN55 896 aaPredicted RBP21.66■■□□□ 1.06
SNX3-202ENST00000349379 TMEM26Q6ZUK4 368 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 PROSER1Q86XN7 944 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 PPIL6Q8IXY8 311 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 MPP5Q8N3R9 675 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 CLDN19Q8N6F1 224 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 OR6P1Q8NGX9 317 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 MFSD3Q96ES6 412 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 RUNDC3BQ96NL0 473 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 NUDT22Q9BRQ3 303 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.66■■□□□ 1.06
SNX3-202ENST00000349379 FOXP3Q9BZS1 431 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 POLR1BQ9H9Y6 1135 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 RDH14Q9HBH5 336 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 ACSL5Q9ULC5 683 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 PRSS21Q9Y6M0 314 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 FREM2Q5SZK8 3169 aa21.66■■□□□ 1.06
SNX3-202ENST00000349379 CCDC187A0A096LP49 1063 aa21.65■■□□□ 1.06
SNX3-202ENST00000349379 OR52A4PA6NMU1 304 aa21.65■■□□□ 1.06
SNX3-202ENST00000349379 DNALI1O14645 258 aaPredicted RBP21.65■■□□□ 1.06
SNX3-202ENST00000349379 DXOO77932 396 aaKnown RBP21.65■■□□□ 1.06
SNX3-202ENST00000349379 GSTM1P09488 218 aa21.65■■□□□ 1.06
SNX3-202ENST00000349379 GSTM4Q03013 218 aa21.65■■□□□ 1.06
SNX3-202ENST00000349379 MAP9Q49MG5 647 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms