RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 ACVRL1P37023 503 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 GRIA1P42261 906 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 THOP1P52888 689 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 PPARDQ03181 441 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 CDH17Q12864 832 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 NAB1Q13506 487 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 C16orf72Q14CZ0 275 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 IRF4Q15306 451 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 WSCD2Q2TBF2 565 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 TMEM52BQ4KMG9 183 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 MANEAQ5SRI9 462 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 HP1BP3Q5SSJ5 553 aaPredicted RBP9.64□□□□□ -0.87
MRPL55-204ENST00000348259 RANBP10Q6VN20 620 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 UNC5AQ6ZN44 842 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 SPRED1Q7Z699 444 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 TMEM135Q86UB9 458 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 EXOC3L1Q86VI1 746 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 C17orf82Q86X59 251 aaPredicted RBP9.64□□□□□ -0.87
MRPL55-204ENST00000348259 SFTPA2Q8IWL1 248 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 OR6C4Q8NGE1 309 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 OR2AP1Q8NGE2 309 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 OR6K2Q8NGY2 324 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 GSDMBQ8TAX9 411 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 PTCD2Q8WV60 388 aaKnown RBP9.64□□□□□ -0.87
MRPL55-204ENST00000348259 SLC44A1Q8WWI5 657 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 OXNAD1Q96HP4 312 aaPredicted RBP9.64□□□□□ -0.87
MRPL55-204ENST00000348259 CEP41Q9BYV8 373 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 TM6SF2Q9BZW4 377 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 IL22Q9GZX6 179 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 ZDHHC6Q9H6R6 413 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 SP110Q9HB58 689 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 ATP13A1Q9HD20 1204 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 SSU72Q9NP77 194 aaKnown RBP9.64□□□□□ -0.87
MRPL55-204ENST00000348259 BFARQ9NZS9 450 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 PSMC3IPQ9P2W1 217 aaPredicted RBP9.64□□□□□ -0.87
MRPL55-204ENST00000348259 DKK3Q9UBP4 350 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 PISDQ9UG56 409 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 TUBD1Q9UJT1 453 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 DGKBQ9Y6T7 804 aa9.64□□□□□ -0.87
MRPL55-204ENST00000348259 FAM237BA0A1B0GVD1 139 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 TSPAN11A1L157 253 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 FAM159BA6NKW6 160 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 MMP20O60882 483 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 TM7SF2O76062 418 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 EPOP01588 193 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 HLA-DQB2P05538 268 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 UGT2B4P06133 528 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 POLBP06746 335 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 ALPIP09923 528 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 TIMP2P16035 220 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 GLB1P16278 677 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 MDH1P40925 334 aaKnown RBP9.63□□□□□ -0.87
MRPL55-204ENST00000348259 MSH2P43246 934 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 SLCO1A2P46721 670 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 BLKP51451 505 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 GYS2P54840 703 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 B4GALNT1Q00973 533 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 SLC10A7Q0GE19 358 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 LBRQ14739 615 aaKnown RBP9.63□□□□□ -0.87
MRPL55-204ENST00000348259 NFATC4Q14934 902 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 NR1D2Q14995 579 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 ELOCQ15369 112 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 MYLK3Q32MK0 819 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 SPANXN3Q5MJ09 141 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 KDELC1Q6UW63 502 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 ZNF438Q7Z4V0 828 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 LRRC6Q86X45 466 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 BBS5Q8N3I7 341 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 DCAKDQ8WVC6 231 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 USP7Q93009 1102 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 PMEPA1Q969W9 287 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 TSACCQ96A04 125 aaPredicted RBP9.63□□□□□ -0.87
MRPL55-204ENST00000348259 KLHL32Q96NJ5 620 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 PSKH2Q96QS6 385 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 ARHGAP9Q9BRR9 750 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 KIFC1Q9BW19 673 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 OSBPL1AQ9BXW6 950 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 CAPS2Q9BXY5 557 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 MRM3Q9HC36 420 aaKnown RBP9.63□□□□□ -0.87
MRPL55-204ENST00000348259 SIRPGQ9P1W8 387 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 GULP1Q9UBP9 304 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 GPR34Q9UPC5 381 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 MAN2B2Q9Y2E5 1009 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 TTLL3Q9Y4R7 772 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 PCDHGA3Q9Y5H0 932 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 RNF215Q9Y6U7 377 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 CSMD1Q96PZ7 3565 aa9.63□□□□□ -0.87
MRPL55-204ENST00000348259 ABCA12Q86UK0 2595 aa9.62□□□□□ -0.87
MRPL55-204ENST00000348259 USP1O94782 785 aa9.62□□□□□ -0.87
MRPL55-204ENST00000348259 POP4O95707 220 aaKnown RBP9.62□□□□□ -0.87
MRPL55-204ENST00000348259 JMJD7P0C870 316 aa9.62□□□□□ -0.87
MRPL55-204ENST00000348259 CNTFP26441 200 aa9.62□□□□□ -0.87
MRPL55-204ENST00000348259 MGAT1P26572 445 aa9.62□□□□□ -0.87
MRPL55-204ENST00000348259 CASRP41180 1078 aa9.62□□□□□ -0.87
MRPL55-204ENST00000348259 SKIDA1Q1XH10 827 aa9.62□□□□□ -0.87
MRPL55-204ENST00000348259 KBTBD12Q3ZCT8 623 aa9.62□□□□□ -0.87
MRPL55-204ENST00000348259 INO80DQ53TQ3 878 aaPredicted RBP9.62□□□□□ -0.87
MRPL55-204ENST00000348259 RALGPS1Q5JS13 557 aa9.62□□□□□ -0.87
MRPL55-204ENST00000348259 LRRC73Q5JTD7 316 aa9.62□□□□□ -0.87
MRPL55-204ENST00000348259 LGSNQ5TDP6 509 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms