RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ZNF195O14628 629 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 STX16O14662 325 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 KLF8O95600 359 aaPredicted RBP21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 HOXB2P14652 356 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 AOAHP28039 575 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 SERPINB3P29508 390 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 CCR7P32248 378 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 GPR1P46091 355 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 KHDC1Q4VXA5 237 aaKnown RBP21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 SPDYAQ5MJ70 313 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 KIAA1211LQ6NV74 962 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 FRA10AC1Q70Z53 315 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 RILPQ96NA2 401 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 FAM126AQ9BYI3 521 aaPredicted RBP21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 ZDHHC2Q9UIJ5 367 aa21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 APOBEC2Q9Y235 224 aaKnown RBP21.15■□□□□ 0.98
TSPAN3-202ENST00000346495 MATN2O00339 956 aa21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 SNX2O60749 519 aa21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 SOD1P00441 154 aa21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 ALDH18A1P54886 795 aaKnown RBP21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 TAS2R38P59533 333 aa21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 PLEKHS1Q5SXH7 462 aa21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 RAET1GQ6H3X3 334 aa21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 MAVSQ7Z434 540 aa21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 CACUL1Q86Y37 369 aa21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 AFAP1L2Q8N4X5 818 aa21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 AGR3Q8TD06 166 aa21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 ACTR5Q9H9F9 607 aaPredicted RBP21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 CD274Q9NZQ7 290 aa21.14■□□□□ 0.97
TSPAN3-202ENST00000346495 A0A1W2PP55 124 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 RAD51BO15315 384 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 INPP4BO15327 924 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 HDAC3O15379 428 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 SGTAO43765 313 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 ADAM23O75077 832 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 S100BP04271 92 aaPredicted RBP21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 IDH3AP50213 366 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 HK3P52790 923 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 MLLT1Q03111 559 aaPredicted RBP21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 TMEM115Q12893 351 aaPredicted RBP21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 GBX1Q14549 363 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 TGFBIQ15582 683 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 SEL1L3Q68CR1 1132 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 SBSNQ6UWP8 590 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 CYHR1Q6ZMK1 362 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 EBF4Q9BQW3 602 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 SHCBP1LQ9BZQ2 653 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 ZCCHC2Q9C0B9 1178 aaKnown RBP21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 COG4Q9H9E3 785 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 MBD1Q9UIS9 605 aaPredicted RBP21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 TSR3Q9UJK0 312 aaKnown RBP21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 CNOT6Q9ULM6 557 aaKnown RBP21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 RRP15Q9Y3B9 282 aaKnown RBP21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 OARD1Q9Y530 152 aa21.13■□□□□ 0.97
TSPAN3-202ENST00000346495 CCDC22O60826 627 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 RNASEH2AO75792 299 aaKnown RBP21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 TM7SF2O76062 418 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 DNTTP04053 509 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 ASGR2P07307 311 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 EEF1DP29692 281 aaKnown RBP21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 BNIP1Q12981 228 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 SMAD2Q15796 467 aaKnown RBP21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 SH2D4BQ5SQS7 431 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 ZNF648Q5T619 568 aaPredicted RBP21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 ANKS6Q68DC2 871 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 EPGNQ6UW88 154 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 CUZD1Q86UP6 607 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 RASGEF1AQ8N9B8 481 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 STON2Q8WXE9 905 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 HLA-CQ95604 372 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 FAR2Q96K12 515 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 C1QTNF3Q9BXJ4 246 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 EPHX3Q9H6B9 360 aa21.12■□□□□ 0.97
TSPAN3-202ENST00000346495 A0A1W2PQF6 199 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 NCF1BA6NI72 391 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 NCF1CA8MVU1 366 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 PCDH8O95206 1070 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 SIX3O95343 332 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 MPC1LP0DKB6 136 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 NCF1P14598 390 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 FBXO43Q4G163 708 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 CLNKQ7Z7G1 428 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 ALYREFQ86V81 257 aaKnown RBP21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 GANCQ8TET4 914 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 MKRN2Q9H000 416 aaKnown RBP21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 SCML1Q9UN30 329 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 SLC12A4Q9UP95 1085 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 ATG2BQ96BY7 2078 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 IGLON5A6NGN9 336 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 OR2AG2A6NM03 316 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 GRID2O43424 1007 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 NUAK1O60285 661 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 DIAPH2O60879 1101 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 ATG13O75143 517 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 RPS17P08708 135 aaKnown RBP21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 COL9A1P20849 921 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 PRLHRP49683 370 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 HSPA14Q0VDF9 509 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 TUBB3Q13509 450 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 PPP1R3AQ16821 1122 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms