RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 RNF11Q9Y3C5 154 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 PCDHA9Q9Y5H5 950 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 OR51B4Q9Y5P0 310 aa14.7□□□□□ -0.06
VIPAS39-202ENST00000343765 PSMA4P25789 261 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 HMGCLP35914 325 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 ROR2Q01974 943 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 PLOD1Q02809 727 aaPredicted RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 PRKCQQ04759 706 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 INPP5AQ14642 412 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 NR6A1Q15406 480 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 CYP51A1Q16850 503 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 CWF19L1Q69YN2 538 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 Q6ZSR9 355 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 ERMP1Q7Z2K6 904 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 EFL1Q7Z2Z2 1120 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 RNF168Q8IYW5 571 aaPredicted RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 STK40Q8N2I9 435 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 PIH1D2Q8WWB5 315 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 CEP295NLQ96MC4 621 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 ZNF382Q96SR6 550 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 KCTD14Q9BQ13 255 aaPredicted RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 ZFYVE1Q9HBF4 777 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 NUDT4Q9NZJ9 180 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 CNOT11Q9UKZ1 510 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 ARHGAP10A1A4S6 786 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 PLOD2O00469 737 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 S100BP04271 92 aaPredicted RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 HSD17B1P14061 328 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 GDF5P43026 501 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 RPL5P46777 297 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 LIPEQ05469 1076 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 SBSNQ6UWP8 590 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 CHERPQ8IWX8 916 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 SFRP1Q8N474 314 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 OR4F6Q8NGB9 312 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 EGFL8Q99944 293 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 SLC2A11Q9BYW1 496 aa14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 CCM2LQ9NUG4 571 aaPredicted RBP14.69□□□□□ -0.06
VIPAS39-202ENST00000343765 FFAR3O14843 346 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 GPR42O15529 346 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 FFAR2O15552 330 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 HTRA2O43464 458 aaPredicted RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 CREB5Q02930 508 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 BCL2L1Q07817 233 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 GTF2H2Q13888 395 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 SLC5A9Q2M3M2 681 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 TPGS2Q68CL5 300 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 KRT80Q6KB66 452 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 GTF2H2CQ6P1K8 395 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 KIAA2013Q8IYS2 634 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 CBR4Q8N4T8 237 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 ALG14Q96F25 216 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 DUS3LQ96G46 650 aaKnown RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 TRMT2BQ96GJ1 504 aaKnown RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 UHRF1Q96T88 793 aaPredicted RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 MRPS26Q9BYN8 205 aaKnown RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 ZNF696Q9H7X3 374 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 CAAP1Q9H8G2 361 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 MAGEE1Q9HCI5 957 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 TLR9Q9NR96 1032 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 INSL5Q9Y5Q6 135 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 GAPDHSO14556 408 aaPredicted RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 OR7A17O14581 309 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 SLC25A14O95258 325 aaPredicted RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 CKMP06732 381 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 G6PDP11413 515 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 ZNF7P17097 686 aaPredicted RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 IL10P22301 178 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 EPHB3P54753 998 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 BNIP2Q12982 314 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 RALGPS2Q86X27 583 aaPredicted RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 TMEM199Q8N511 208 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 DCAF4L2Q8NA75 395 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 ZUFSPQ96AP4 578 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 OSBPL11Q9BXB4 747 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 TRIM54Q9BYV2 358 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 IPPKQ9H8X2 491 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 IL26Q9NPH9 171 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 ARMC1Q9NVT9 282 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 ELOVL2Q9NXB9 296 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 ACTR3BQ9P1U1 418 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 LEF1Q9UJU2 399 aaPredicted RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 POLR3HQ9Y535 204 aaPredicted RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 GREM1O60565 184 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 EEDO75530 441 aaKnown RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 GJA1P17302 382 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 RPL10P27635 214 aaKnown RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 HNF1BP35680 557 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 ADARP55265 1226 aaKnown RBP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 NFATC2Q13469 925 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 ABRAXAS2Q15018 415 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 ZNF783Q6ZMS7 281 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 ADAMTSL2Q86TH1 951 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 TSPAN33Q86UF1 283 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 GRIN3AQ8TCU5 1115 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 PROKR1Q8TCW9 393 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 PPM1MQ96MI6 270 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 BRINP2Q9C0B6 783 aa14.68□□□□□ -0.06
VIPAS39-202ENST00000343765 CRLS1Q9UJA2 301 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms