RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ATP6AP2A0A1C7CYW4 349 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 DLGAP1O14490 977 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 TOR1BO14657 336 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 RYKP34925 604 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 DSTNP60981 165 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 TOMM20Q15388 145 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 LSM12Q3MHD2 195 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 LPCAT4Q643R3 524 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 PDSS2Q86YH6 399 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 UBE2J2Q8N2K1 259 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 CNTD1Q8N815 330 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZNF354BQ96LW1 612 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 MBOAT7Q96N66 472 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 PPP1R16BQ96T49 567 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 NIF3L1Q9GZT8 377 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ABCG4Q9H172 646 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 C11orf16Q9NQ32 467 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZMYM5Q9UJ78 669 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SLC35F4A4IF30 521 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 KRBOX1C9JBD0 128 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 EIF1AYO14602 144 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZMPSTE24O75844 475 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SCGB1D2O95969 90 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 MOCS2O96007 188 aaPredicted RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 CYB5AP00167 134 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 EIF1AXP47813 144 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 BCAMP50895 628 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 HERVK_113P62684 666 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SMARCB1Q12824 385 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 USP17L2Q6R6M4 530 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 USP49Q70CQ1 688 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 DCUN1D3Q8IWE4 304 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 CLIP4Q8N3C7 705 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 C12orf45Q8N5I9 185 aaPredicted RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 TMEM161BQ8NDZ6 487 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SCGB1C1Q8TD33 95 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SH3RF3Q8TEJ3 882 aaPredicted RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 DNAJB3Q8WWF6 145 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 CNDP2Q96KP4 475 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 NPLQ9BXD5 320 aaPredicted RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 TUBE1Q9UJT0 475 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 RAP2CQ9Y3L5 183 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ADGRF5Q8IZF2 1346 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 RGPD5Q99666 1765 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 EPORP19235 508 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 CERS1P27544 350 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ST8SIA6P61647 398 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 MPP1Q00013 466 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 DLGAP5Q15398 846 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SEC23AQ15436 765 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 HSDL1Q3SXM5 330 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SLC35F3Q8IY50 421 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 UBQLNLQ8IYU4 475 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 RBM15BQ8NDT2 890 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZNF248Q8NDW4 579 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZFP28Q8NHY6 868 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 AURKBQ96GD4 344 aaPredicted RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 CNPPD1Q9BV87 410 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 IDI2Q9BXS1 227 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ELAC1Q9H777 363 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 TMEM185BQ9H7F4 350 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 LRFN1Q9P244 771 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ROS1P08922 2347 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SULT1C2O00338 296 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 FPGTO14772 594 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 RARAP10276 462 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 CAPN3P20807 821 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 MAGEB1P43366 347 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 TAS2R39P59534 338 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZNF460Q14592 562 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZNF404Q494X3 552 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 PTF1AQ7RTS3 328 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 MILR1Q7Z6M3 343 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 SYVN1Q86TM6 617 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 OR4Q3Q8NH05 313 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 HNRNPABQ99729 332 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 OSBPL7Q9BZF2 842 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZNF436Q9C0F3 470 aaPredicted RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 OR10A4Q9H209 315 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 CRYL1Q9Y2S2 319 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 NR2E1Q9Y466 385 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 CD72P21854 359 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 MXD1Q05195 221 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZNF268Q14587 947 aaPredicted RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 OR10H4Q8NGA5 316 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 TMEM248Q9NWD8 314 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.11□□□□□ -1.43
VCAN-203ENST00000343200 NARFQ9UHQ1 456 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 POMT1Q9Y6A1 747 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 HACD1B0YJ81 288 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 KBTBD13C9JR72 458 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 LARGE1O95461 756 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ALDH3B1P43353 468 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZNF616Q08AN1 781 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 CUL2Q13617 745 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 ZCCHC23Q6ZST2 131 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 BEND5Q7L4P6 421 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 DDX1Q92499 740 aaKnown RBP6.11□□□□□ -1.43
VCAN-203ENST00000343200 PHF24Q9UPV7 400 aa6.11□□□□□ -1.43
VCAN-203ENST00000343200 DLGAP4Q9Y2H0 992 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms