RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CRTC3Q6UUV7 619 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 GALNT5Q7Z7M9 940 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 OOSP2Q86WS3 158 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 HID1Q8IV36 788 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 MAPK15Q8TD08 544 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 REXO4Q9GZR2 422 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 ABCB10Q9NRK6 738 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 CNOT6Q9ULM6 557 aaKnown RBP7.11□□□□□ -1.27
VCAN-202ENST00000342785 SPACA6W5XKT8 324 aa7.11□□□□□ -1.27
VCAN-202ENST00000342785 NUP98P52948 1817 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ILVBLA1L0T0 632 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 OR2AG2A6NM03 316 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PTGESO14684 152 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 FFAR2O15552 330 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ALDH1A2O94788 518 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 EPOP01588 193 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PRPS2P11908 318 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ITGA2P17301 1181 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 RPS14P62263 151 aaKnown RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 FNDC3BQ53EP0 1204 aaKnown RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 ATAD3BQ5T9A4 648 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 SULT1C3Q6IMI6 304 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 SERPINA13PQ6UXR4 307 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 NAPRTQ6XQN6 538 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 NPAS4Q8IUM7 802 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 NSMCE3Q96MG7 304 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 CGREF1Q99674 301 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 RBM4BQ9BQ04 359 aaKnown RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 RBM4Q9BWF3 364 aaKnown RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 SH3GLB1Q9Y371 365 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 EFCAB10A6NFE3 127 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 H3BSA7 217 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 MYL12BO14950 172 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 CBFA2T3O75081 653 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 RPN2P04844 631 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 CCDC159P0C7I6 412 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PRKCQQ04759 706 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PRKCZQ05513 592 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 TGM3Q08188 693 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 NIPAL4Q0D2K0 466 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PPP1R8Q12972 351 aaKnown RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 RSBN1Q5VWQ0 802 aaPredicted RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 RD3Q7Z3Z2 195 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 DEPDC4Q8N2C3 294 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 UMODL1-AS1Q8N2C9 162 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 GLB1L3Q8NCI6 653 aaPredicted RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 TOP1MTQ969P6 601 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 TLE6Q9H808 572 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PDP1Q9P0J1 537 aaPredicted RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 MRPS23Q9Y3D9 190 aaKnown RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 LAMB4A4D0S4 1761 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 LCHNA4D1U4 455 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PFKMP08237 780 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 HAPLN1P10915 354 aaPredicted RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 IGFBP5P24593 272 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PPM1AP35813 382 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 RPL3P39023 403 aaKnown RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 SGCGQ13326 291 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 EIF3MQ7L2H7 374 aaKnown RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 LIX1Q8N485 282 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PSMA8Q8TAA3 256 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 EZH1Q92800 747 aaPredicted RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 MYDGFQ969H8 173 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 KIAA1191Q96A73 305 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ABHD8Q96I13 439 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 MAGEB10Q96LZ2 347 aaPredicted RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 IL12RB2Q99665 862 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PAAF1Q9BRP4 392 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 CD320Q9NPF0 282 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 CIDEBQ9UHD4 219 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 VPS51Q9UID3 782 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 SLC45A1Q9Y2W3 748 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 DNAJC25-GNG10A0A024R161 153 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ASLP04424 464 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ANXA4P09525 319 aaPredicted RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 ELFN1P0C7U0 828 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 SLC6A2P23975 617 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 CXCR2P25025 360 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 MAGEA6P43360 314 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ACADVLP49748 655 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 SERINC3Q13530 473 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 RFTN1Q14699 578 aaPredicted RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 TRNP1Q6NT89 227 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 TRAF7Q6Q0C0 670 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PHF21AQ96BD5 680 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 NODALQ96S42 347 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 FANCEQ9HB96 536 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 DOLKQ9UPQ8 538 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 SCML2Q9UQR0 700 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ANGPT4Q9Y264 503 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 AKAP11Q9UKA4 1901 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 TRPM3Q9HCF6 1732 aaPredicted RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 A0A1W2PP18 115 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ANKRD66B4E2M5 251 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 CXCR6O00574 342 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ERAL1O75616 437 aaKnown RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 IL6P05231 212 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 RAP2AP10114 183 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 IMPDH2P12268 514 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 GPR17Q13304 367 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms