RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 ASH2LQ9UBL3 628 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 SLCO3A1Q9UIG8 710 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 MTO1Q9Y2Z2 717 aaKnown RBP16.77■□□□□ 0.28
CDK11B-201ENST00000340677 LOC110117498-PIK3R3F6TDL0 507 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 CLIC2O15247 247 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 VEGFDO43915 354 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 HUS1O60921 280 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 PRKRAO75569 313 aaKnown RBP16.77■□□□□ 0.28
CDK11B-201ENST00000340677 BEST1O76090 585 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 PIGRP01833 764 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 IGHA2P01877 340 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 SLC7A2P52569 658 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 KCNAB1Q14722 419 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 DGKKQ5KSL6 1271 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 C16orf62Q7Z3J2 963 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 VN1R5Q7Z5H4 357 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 PLD5Q8N7P1 536 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 POC5Q8NA72 575 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 KDF1Q8NAX2 398 aaPredicted RBP16.77■□□□□ 0.28
CDK11B-201ENST00000340677 DTD1Q8TEA8 209 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 SLC35C1Q96A29 364 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 CCDC124Q96CT7 223 aaKnown RBP16.77■□□□□ 0.28
CDK11B-201ENST00000340677 SERPINB11Q96P15 392 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 RBM4BQ9BQ04 359 aaKnown RBP16.77■□□□□ 0.28
CDK11B-201ENST00000340677 RBM4Q9BWF3 364 aaKnown RBP16.77■□□□□ 0.28
CDK11B-201ENST00000340677 ROGDIQ9GZN7 287 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 TMEM134Q9H6X4 195 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 CATSPERBQ9H7T0 1116 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 ERAP1Q9NZ08 941 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 AP4E1Q9UPM8 1137 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 ASB4Q9Y574 426 aa16.77■□□□□ 0.28
CDK11B-201ENST00000340677 CASP8AP2Q9UKL3 1982 aa16.77■□□□□ 0.27
CDK11B-201ENST00000340677 DENND3A2RUS2 1198 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 EFCAB10A6NFE3 127 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 GBX2P52951 348 aaPredicted RBP16.76■□□□□ 0.27
CDK11B-201ENST00000340677 EPHB1P54762 984 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 HNRNPKP61978 463 aaKnown RBP eCLIP16.76■□□□□ 0.27
CDK11B-201ENST00000340677 ZNF484Q5JVG2 852 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 LYSMD2Q8IV50 215 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 UBL4BQ8N7F7 174 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 OXNAD1Q96HP4 312 aaPredicted RBP16.76■□□□□ 0.27
CDK11B-201ENST00000340677 GPR61Q9BZJ8 451 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 POLR1BQ9H9Y6 1135 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 ACTL7BQ9Y614 415 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 LDLRAD4O15165 306 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 PMM2O15305 246 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 CA12O43570 354 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 APOL3O95236 402 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 APOA1P02647 267 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 ASGR1P07306 291 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 ANXA6P08133 673 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 IL7P13232 177 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 CASP4P49662 377 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 TFAP2EQ6VUC0 442 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 ARCQ7LC44 396 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 TMEM126BQ8IUX1 230 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 TIGD4Q8IY51 512 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 ZNF321PQ8N8H1 164 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 ZFAND1Q8TCF1 268 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 SLC9A7Q96T83 725 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 NEU1Q99519 415 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 ABCG8Q9H221 673 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 TTYH1Q9H313 450 aaPredicted RBP16.76■□□□□ 0.27
CDK11B-201ENST00000340677 MTRRQ9UBK8 725 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 DGKBQ9Y6T7 804 aa16.76■□□□□ 0.27
CDK11B-201ENST00000340677 MFSD2BA6NFX1 497 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 ACSL3O95573 720 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 TNNI3P19429 210 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 MATN1P21941 496 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 CPOXP36551 454 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 PSPHP78330 225 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 RPL6Q02878 288 aaKnown RBP16.75■□□□□ 0.27
CDK11B-201ENST00000340677 NR1H3Q13133 447 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 BROXQ5VW32 411 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 POLNQ7Z5Q5 900 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 DEDD2Q8WXF8 326 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 SYN2Q92777 582 aaPredicted RBP16.75■□□□□ 0.27
CDK11B-201ENST00000340677 COPS5Q92905 334 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 CSPG4P5Q96PW8 444 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 BBS4Q96RK4 519 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 TRIM56Q9BRZ2 755 aaKnown RBP16.75■□□□□ 0.27
CDK11B-201ENST00000340677 C1orf21Q9H246 121 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 GPN2Q9H9Y4 310 aaPredicted RBP16.75■□□□□ 0.27
CDK11B-201ENST00000340677 TJP2Q9UDY2 1190 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 RIMS3Q9UJD0 308 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 COG5Q9UP83 839 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 KAT6AQ92794 2004 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 ZBTB42B2RXF5 422 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 ZNF197O14709 1029 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 PSTPIP1O43586 416 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 SMPD2O60906 423 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 GNAO1P09471 354 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 DARSP14868 501 aaKnown RBP16.75■□□□□ 0.27
CDK11B-201ENST00000340677 NDUFB7P17568 137 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 OGNP20774 298 aaKnown RBP16.75■□□□□ 0.27
CDK11B-201ENST00000340677 GLRA2P23416 452 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 TIE1P35590 1138 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 PPM1FP49593 454 aaPredicted RBP16.75■□□□□ 0.27
CDK11B-201ENST00000340677 MFAP3P55082 362 aa16.75■□□□□ 0.27
CDK11B-201ENST00000340677 SERINC3Q13530 473 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms