RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 TRAP1Q12931 704 aaKnown RBP7.53□□□□□ -1.2
HIPK1-201ENST00000340480 MAPKAPK3Q16644 382 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 PLEKHG6Q3KR16 790 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 RAB6CQ53S08 254 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 INTS11Q5TA45 600 aaKnown RBP7.53□□□□□ -1.2
HIPK1-201ENST00000340480 ZNF549Q6P9A3 640 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 R3HCC1LQ7Z5L2 792 aaKnown RBP7.53□□□□□ -1.2
HIPK1-201ENST00000340480 PHYKPLQ8IUZ5 450 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 ARHGAP12Q8IWW6 846 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 SLC39A11Q8N1S5 342 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 PQLC1Q8N2U9 271 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 GRIN3AQ8TCU5 1115 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 SH3RF2Q8TEC5 729 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 LENG8Q96PV6 779 aaPredicted RBP7.53□□□□□ -1.2
HIPK1-201ENST00000340480 TBCDQ9BTW9 1192 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 RAB6CQ9H0N0 254 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 S100A14Q9HCY8 104 aa7.53□□□□□ -1.2
HIPK1-201ENST00000340480 MT-CO1P00395 513 aa7.52□□□□□ -1.2
HIPK1-201ENST00000340480 ASMTP46597 345 aa7.52□□□□□ -1.2
HIPK1-201ENST00000340480 USP46P62068 366 aa7.52□□□□□ -1.2
HIPK1-201ENST00000340480 SP140Q13342 867 aa7.52□□□□□ -1.2
HIPK1-201ENST00000340480 ADCK1Q86TW2 530 aa7.52□□□□□ -1.2
HIPK1-201ENST00000340480 CXorf40BQ96DE9 158 aa7.52□□□□□ -1.2
HIPK1-201ENST00000340480 MGME1Q9BQP7 344 aa7.52□□□□□ -1.2
HIPK1-201ENST00000340480 GNG14A0A1W2PPG7 69 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 HHLA1C9JL84 531 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 PEX11AO75192 247 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 AP2A2O94973 939 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 GPR1P46091 355 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 DGKGP49619 791 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 CDH13P55290 713 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 METTL2BQ6P1Q9 378 aaKnown RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 FBXO46Q6PJ61 603 aaPredicted RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 KDELC1Q6UW63 502 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 CASD1Q96PB1 797 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 PRRG4Q9BZD6 226 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 BRD9Q9H8M2 597 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 A0A0J9YYE9 177 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 NPEPPSL1A6NEC2 478 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 FGF18O76093 207 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 RB1P06400 928 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 ZNF23P17027 643 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 TNK2Q07912 1038 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 RFX4Q33E94 735 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 TTC33Q6PID6 262 aaPredicted RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 UBE2R2Q712K3 238 aaPredicted RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 SYT12Q8IV01 421 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 BHLHE22Q8NFJ8 381 aaPredicted RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 IMPAD1Q9NX62 359 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 PNMA8BQ9ULN7 279 aaPredicted RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 ERVW-1Q9UQF0 538 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 FCF1Q9Y324 198 aaKnown RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 GPIP06744 558 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 CD68P34810 354 aaPredicted RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 HNMTP50135 292 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 PDX1P52945 283 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 DEFA1P59665 94 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 DEFA3P59666 94 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 CBLBQ13191 982 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 FRMD7Q6ZUT3 714 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 TMEM126BQ8IUX1 230 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 CELF5Q8N6W0 485 aaKnown RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 GSTCDQ8NEC7 633 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 IGSF8Q969P0 613 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 IL23AQ9NPF7 189 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 GKN1Q9NS71 199 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 ADAM30Q9UKF2 790 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 ATAD5Q96QE3 1844 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 ZNF37AP17032 561 aaPredicted RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 PEX19P40855 299 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 ST13P50502 369 aaKnown RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 ERVK-8P63133 956 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 ECT2LQ008S8 904 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 ANXA8L1Q5VT79 327 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 ERICH5Q6P6B1 374 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 OTOP2Q7RTS6 562 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 VN1R5Q7Z5H4 357 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 TRAPPC5Q8IUR0 188 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 CPXM2Q8N436 756 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 GALNT4Q8N4A0 578 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 SETD9Q8NE22 299 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 OR13C4Q8NGS5 318 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 ARNTL2Q8WYA1 636 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 B3GALT6Q96L58 329 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 FCRL3Q96P31 734 aaPredicted RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 RAD9AQ99638 391 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 CXorf56Q9H5V9 222 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 TLE6Q9H808 572 aa7.52□□□□□ -1.21
HIPK1-201ENST00000340480 EXOSC4Q9NPD3 245 aaKnown RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 RBBP6Q7Z6E9 1792 aaKnown RBP7.52□□□□□ -1.21
HIPK1-201ENST00000340480 CLDN9O95484 217 aa7.51□□□□□ -1.21
HIPK1-201ENST00000340480 COPZ1P61923 177 aa7.51□□□□□ -1.21
HIPK1-201ENST00000340480 LAPTM5Q13571 262 aa7.51□□□□□ -1.21
HIPK1-201ENST00000340480 PDGFRLQ15198 375 aa7.51□□□□□ -1.21
HIPK1-201ENST00000340480 TSNQ15631 228 aaKnown RBP7.51□□□□□ -1.21
HIPK1-201ENST00000340480 CAPN13Q6MZZ7 669 aaPredicted RBP7.51□□□□□ -1.21
HIPK1-201ENST00000340480 C22orf39Q6P5X5 142 aa7.51□□□□□ -1.21
HIPK1-201ENST00000340480 IYDQ6PHW0 289 aa7.51□□□□□ -1.21
HIPK1-201ENST00000340480 LINGO4Q6UY18 593 aa7.51□□□□□ -1.21
HIPK1-201ENST00000340480 LRRC70Q7Z2Q7 622 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms