RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ALDH5A1P51649 535 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ACTR1AP61163 376 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 LAPTM5Q13571 262 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PDGFRLQ15198 375 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 FNBP1LQ5T0N5 605 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 AGMOQ6ZNB7 445 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 STK32CQ86UX6 486 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ADSSL1Q8N142 457 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM74Q96NL1 305 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MCMBPQ9BTE3 642 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 IER2Q9BTL4 223 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 NUDT9Q9BW91 350 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 WDR26Q9H7D7 661 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CCDC195A0A1B0GUA6 201 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PRORSD1PA6NEY8 169 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CENPBD1B2RD01 187 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 NEDD8-MDP1E9PL57 170 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 NPC1O15118 1278 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 GRID2O43424 1007 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CLEC3AO75596 197 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 DLGAP3O95886 979 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MT-ND5P03915 603 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CYP17A1P05093 508 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ANXA3P12429 323 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 RPA1P27694 616 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CDH5P33151 784 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MAP2K4P45985 399 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ZNF45Q02386 682 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SMAD4Q13485 552 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 FASTKD3Q14CZ7 662 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 HERC3Q15034 1050 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SLC14A2Q15849 920 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SPDYE7PQ495Y7 208 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 STXBP5Q5T5C0 1151 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 DNAJB14Q8TBM8 379 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 DYNLL2Q96FJ2 89 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SEC16BQ96JE7 1060 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ARL5BQ96KC2 179 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ELOVL6Q9H5J4 265 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 RANBP3Q9H6Z4 567 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MEPEQ9NQ76 525 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 KCNQ5Q9NR82 932 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CYB5R1Q9UHQ9 305 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CDC14AQ9UNH5 594 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 GBF1Q92538 1859 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SPTBP11277 2137 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ATRNL1Q5VV63 1379 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CDK2AP1O14519 115 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 AIM2O14862 343 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 UBDO15205 165 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PHGDHO43175 533 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 NPHS1O60500 1241 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ZNF432O94892 652 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MT-CO2P00403 227 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MAGEA11P43364 429 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 RPS6P62753 249 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ADAM8P78325 824 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CAMK2DQ13557 499 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 HMGN3Q15651 99 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SLITRK4Q8IW52 837 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CYP4X1Q8N118 509 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 CNTD1Q8N815 330 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ETNPPLQ8TBG4 499 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 KCTD13Q8WZ19 329 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 FGGYQ96C11 551 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 PI4K2AQ9BTU6 479 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 MND1Q9BWT6 205 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 FAM126AQ9BYI3 521 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 KCTD10Q9H3F6 313 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 WDCPQ9H6R7 721 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 TMBIM4Q9HC24 238 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SMURF1Q9HCE7 757 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SMYD2Q9NRG4 433 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 EIF3KQ9UBQ5 218 aaKnown RBP3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ZNHIT2Q9UHR6 403 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 ANGPT4Q9Y264 503 aa3.26□□□□□ -1.89
CSMD3-202ENST00000339701 SPTBN2O15020 2390 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ATP6AP2A0A1C7CYW4 349 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 TPST1O60507 370 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ABCB7O75027 752 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ATP6AP2O75787 350 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 VTNP04004 478 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 THEGLP0DJG4 465 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 S100A2P29034 98 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ADORA2BP29275 332 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 SLC6A6P31641 620 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 GPR15P49685 360 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ARFIP1P53367 373 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 PUDPQ08623 228 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 GPS1Q13098 491 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ALG10BQ5I7T1 473 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 INTS6LQ5JSJ4 861 aaKnown RBP3.25□□□□□ -1.89
CSMD3-202ENST00000339701 ZYG11AQ6WRX3 759 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 USP43Q70EL4 1123 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 MCUQ8NE86 351 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 GMCL1P1Q8NEA9 526 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 STOML3Q8TAV4 291 aa3.25□□□□□ -1.89
CSMD3-202ENST00000339701 HPSE2Q8WWQ2 592 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms