RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 OR4F21O95013 312 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 RPS17P08708 135 aaKnown RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 HOXB8P17481 243 aaPredicted RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 DIO3P55073 304 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 ERVPABLB-1P60509 514 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 GALNT1Q10472 559 aaPredicted RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 CYLC2Q14093 348 aaPredicted RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 PPP2R2DQ66LE6 453 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 ANKS6Q68DC2 871 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 CHSY3Q70JA7 882 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 METTL3Q86U44 580 aaKnown RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 TRIM74Q86UV6 250 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 FUNDC1Q8IVP5 155 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 DSELQ8IZU8 1212 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 OR2T11Q8NH01 316 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 SMARCD2Q92925 531 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 LRCH3Q96II8 777 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 TEX37Q96LM6 180 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 SLC39A3Q9BRY0 314 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 RIOK2Q9BVS4 552 aaKnown RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 CEP44Q9C0F1 390 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 C1orf21Q9H246 121 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 NOL11Q9H8H0 719 aaKnown RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 RNPEPL1Q9HAU8 725 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 LATS2Q9NRM7 1088 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 GMPR2Q9P2T1 348 aaKnown RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 IL36AQ9UHA7 158 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 ZMYM5Q9UJ78 669 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 WDR87Q6ZQQ6 2873 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 TRPC5OSA6NMA1 111 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 FBP2O00757 339 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 UBDO15205 165 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 PFDN6O15212 129 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 INPP4BO15327 924 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 FFAR2O15552 330 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 SPINT1O43278 529 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 SGTAO43765 313 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 KLK8O60259 260 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 MAGEC1O60732 1142 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 SNX2O60749 519 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 ATP5BP06576 529 aaKnown RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 ENO3P13929 434 aaPredicted RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 TCN1P20061 433 aaPredicted RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 FSHRP23945 695 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 FCARP24071 287 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 ARL1P40616 181 aaPredicted RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 WASP42768 502 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 RAP1GDS1P52306 607 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 RALGDSQ12967 914 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 LCP2Q13094 533 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 ARHGEF7Q14155 803 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 RCN1Q15293 331 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 TBCCQ15814 346 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 RBBP7Q16576 425 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 AGKQ53H12 422 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 SYCE2Q6PIF2 218 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 LAYNQ6UX15 382 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 VITQ6UXI7 678 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 PARS2Q7L3T8 475 aaKnown RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 RTL10Q7L3V2 364 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 PHYKPLQ8IUZ5 450 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 CBARPQ8N350 705 aaPredicted RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 ZBTB2Q8N680 514 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 CPSF7Q8N684 471 aaKnown RBP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 LEMD2Q8NC56 503 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 NRG4Q8WWG1 115 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 COPS8Q99627 209 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 KXD1Q9BQD3 176 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 CCDC28BQ9BUN5 200 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 TRIM8Q9BZR9 551 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 GNPTGQ9UJJ9 305 aa7.29□□□□□ -1.24
SRFBP1-201ENST00000339397 GON4LQ3T8J9 2241 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 OR7A17O14581 309 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 GPC4O75487 556 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 FGF4P08620 206 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 CCND1P24385 295 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 NNMTP40261 264 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 SOX9P48436 509 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 HTR6P50406 440 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 TBL3Q12788 808 aaKnown RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 WASHC2DQ5SRD0 308 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 C9orf64Q5T6V5 341 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 C1orf146Q5VVC0 180 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 PDE12Q6L8Q7 609 aaKnown RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 PGM2L1Q6PCE3 622 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 MACC1Q6ZN28 852 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 RNF111Q6ZNA4 994 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 RAB44Q7Z6P3 723 aaPredicted RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 LMNTD1Q8N9Z9 388 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 SKA2Q8WVK7 121 aaPredicted RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 PYDC1Q8WXC3 89 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 FGF14Q92915 247 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 PYCR2Q96C36 320 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 OTUB2Q96DC9 234 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 CDRT15Q96T59 188 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 HTATIP2Q9BUP3 242 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 FARSBQ9NSD9 589 aaKnown RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 ZDHHC3Q9NYG2 299 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 POLG2Q9UHN1 485 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms