RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 RFTN2Q52LD8 501 aaPredicted RBP13.6□□□□□ -0.23
RTN4-202ENST00000337526 C9orf64Q5T6V5 341 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 ZDHHC20Q5W0Z9 365 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 ZC3H3Q8IXZ2 948 aaKnown RBP13.6□□□□□ -0.23
RTN4-202ENST00000337526 ZZZ3Q8IYH5 903 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 LIX1Q8N485 282 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 NAT16Q8N8M0 369 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 PDPRQ8NCN5 879 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 DDX1Q92499 740 aaKnown RBP13.6□□□□□ -0.23
RTN4-202ENST00000337526 CXorf40BQ96DE9 158 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 UGT2B17O75795 530 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 SPATA31D3P0C874 917 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 SP2Q02086 613 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 SP3Q02447 781 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 MERTKQ12866 999 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 MPP2Q14168 576 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 HERC3Q15034 1050 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 SPATA31D4Q6ZUB0 917 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 KRT74Q7RTS7 529 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 PHTF2Q8N3S3 785 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 SIDT2Q8NBJ9 832 aaKnown RBP13.6□□□□□ -0.23
RTN4-202ENST00000337526 C7orf43Q8WVR3 580 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 HAPLN3Q96S86 360 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 TRIM8Q9BZR9 551 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 ZFP37Q9Y6Q3 630 aaPredicted RBP13.6□□□□□ -0.23
RTN4-202ENST00000337526 ROBO1Q9Y6N7 1651 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 CXCR6O00574 342 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 IRAK2O43187 625 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 STBD1O95210 358 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 MYL9P24844 172 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 SULT2A1Q06520 285 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 SULT1C3Q6IMI6 304 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 FAM131AQ6UXB0 335 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 CXXC5Q7LFL8 322 aaKnown RBP13.6□□□□□ -0.23
RTN4-202ENST00000337526 ZDHHC21Q8IVQ6 265 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 GLB1L3Q8NCI6 653 aaPredicted RBP13.6□□□□□ -0.23
RTN4-202ENST00000337526 EEF1AKMT1Q8WVE0 214 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 NARS2Q96I59 477 aaKnown RBP13.6□□□□□ -0.23
RTN4-202ENST00000337526 NSMCE3Q96MG7 304 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 CHCHD6Q9BRQ6 235 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 FAM83DQ9H4H8 585 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 AASDHPPTQ9NRN7 309 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 C1orf109Q9NX04 203 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 GTF2IRD1Q9UHL9 959 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 OR10H1Q9Y4A9 318 aa13.6□□□□□ -0.23
RTN4-202ENST00000337526 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 OR51F1A6NGY5 319 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 DLX3O60479 287 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 F7P08709 466 aaPredicted RBP13.59□□□□□ -0.23
RTN4-202ENST00000337526 RAP2AP10114 183 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 PSMD4P55036 377 aaKnown RBP13.59□□□□□ -0.23
RTN4-202ENST00000337526 MPPE1Q53F39 396 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 PAQR3Q6TCH7 311 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 MOSPD2Q8NHP6 518 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 LMO3Q8TAP4 145 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 LRRC3Q9BY71 257 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 GPSM3Q9Y4H4 160 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 PIK3C2AO00443 1686 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 FAM240BA0A1B0GVZ2 78 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 SSNA1O43805 119 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 AIREO43918 545 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 OR10H2O60403 315 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 CCNKO75909 580 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 IFNW1P05000 195 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 PRKAR1AP10644 381 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 PRKCHP24723 683 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 HERVK_113P63132 956 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 SLC9A4Q6AI14 798 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 NANOGNBQ7Z5D8 188 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 AHI1Q8N157 1196 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 SVOPLQ8N434 492 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 RAB2BQ8WUD1 216 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 SLC35F5Q8WV83 523 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 ZNF570Q96NI8 536 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 ERVK-6Q9BXR3 956 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 C1orf21Q9H246 121 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 TFB2MQ9H5Q4 396 aaKnown RBP13.59□□□□□ -0.23
RTN4-202ENST00000337526 CACNG4Q9UBN1 327 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 ZNF510Q9Y2H8 683 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 OR2AG2A6NM03 316 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 FADS2P1A8MWK0 482 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 NEDD8-MDP1E9PL57 170 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 hCG_2039718K7EN88 272 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 ADAMDEC1O15204 470 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 ATG13O75143 517 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 AHSGP02765 367 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 HIST1H2ABP04908 130 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 IFNA16P05015 189 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 CTSEP14091 401 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 TAS2R41P59536 307 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 CARTPTQ16568 116 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 TIGD5Q53EQ6 642 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 HIST3H2AQ7L7L0 130 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 ZC3HC1Q86WB0 502 aaKnown RBP13.59□□□□□ -0.23
RTN4-202ENST00000337526 HIST1H2ACQ93077 130 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 BORCS6Q96GS4 357 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 SIGLEC10Q96LC7 697 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 C3orf14Q9HBI5 128 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 CD320Q9NPF0 282 aa13.59□□□□□ -0.23
RTN4-202ENST00000337526 INTS10Q9NVR2 710 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms