RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 EFCAB1Q9HAE3 211 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 OR1I1O60431 355 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 RPLP2P05387 115 aaKnown RBP13.74□□□□□ -0.21
SF1-202ENST00000334944 SERPINF2P08697 491 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 GPR17Q13304 367 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 PAQR3Q6TCH7 311 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 SLC22A16Q86VW1 577 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 LPCAT1Q8NF37 534 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 OR6K2Q8NGY2 324 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 SNX19Q92543 992 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 LRCH3Q96II8 777 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 C1orf50Q9BV19 199 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 DGCR6LQ9BY27 220 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 TRIT1Q9H3H1 467 aaKnown RBP13.74□□□□□ -0.21
SF1-202ENST00000334944 SARS2Q9NP81 518 aaKnown RBP13.74□□□□□ -0.21
SF1-202ENST00000334944 ITM2CQ9NQX7 267 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 POLR3BQ9NW08 1133 aaPredicted RBP13.74□□□□□ -0.21
SF1-202ENST00000334944 V9GYQ6 96 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 TRPC5OSA6NMA1 111 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 DRGXA6NNA5 263 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 TRIM38O00635 465 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 PQBP1O60828 265 aaKnown RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 CAPNS1P04632 268 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 GFAPP14136 432 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 MRPL58Q14197 206 aaKnown RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 TRIM25Q14258 630 aaKnown RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 ACAP2Q15057 778 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 ZIK1Q3SY52 487 aaPredicted RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 UNC50Q53HI1 259 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 ATAD3BQ5T9A4 648 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 EPHX4Q8IUS5 362 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 CCDC117Q8IWD4 279 aaPredicted RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 DDIASQ8IXT1 998 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 TSPAN17Q96FV3 270 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 SH3YL1Q96HL8 342 aaPredicted RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 MID1IP1Q9NPA3 183 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 SEMA4BQ9NPR2 832 aaPredicted RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 SLCO1B7G3V0H7 640 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 TMEM189-UBE2V1I3L0A0 370 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 INPPL1O15357 1258 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 INHAP05111 366 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 GALTP07902 379 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 RBP1P09455 135 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 ADSLP30566 484 aaPredicted RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 MAGEA11P43364 429 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 KPNA2P52292 529 aaKnown RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 YBX1P67809 324 aaKnown RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 NKX3-2P78367 333 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 MERTKQ12866 999 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 PARP15Q460N3 678 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 CCDC58Q4VC31 144 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 ZNF678Q5SXM1 525 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 TMC5Q6UXY8 1006 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 MMAAQ8IVH4 418 aaKnown RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 CPSF7Q8N684 471 aaKnown RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 OR4L1Q8NH43 312 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 LILRB4Q8NHJ6 448 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 SLC30A3Q99726 388 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 CINPQ9BW66 212 aaPredicted RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 CATSPERZQ9NTU4 200 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 SRRDQ9UH36 339 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 CNOT11Q9UKZ1 510 aaKnown RBP13.73□□□□□ -0.21
SF1-202ENST00000334944 N6AMT1Q9Y5N5 214 aa13.73□□□□□ -0.21
SF1-202ENST00000334944 C2orf78A6NCI8 922 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 IQCF5A8MTL0 148 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 CD1DP15813 335 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 COPZ1P61923 177 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 RHDQ02161 417 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 AQP6Q13520 282 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 PEX5LQ8IYB4 626 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 FBXO22Q8NEZ5 403 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 MDGA1Q8NFP4 955 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 CDKN2AIPNLQ96HQ2 116 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 DOK1Q99704 481 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 RAD21L1Q9H4I0 556 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 EGFL7Q9UHF1 273 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 RABL2BQ9UNT1 228 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 FAM92AA1XBS5 289 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 OR6C75A6NL08 312 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 SUPT3HB4E1H0 165 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 CLDN25C9JDP6 229 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 ZNF701M0R085 212 aaPredicted RBP13.72□□□□□ -0.21
SF1-202ENST00000334944 CDC7O00311 574 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 COCHO43405 550 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 RHOBTB1O94844 696 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 IGLV3-27P01718 113 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 LINC00032P0C843 101 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 CHRM3P20309 590 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 ATP5C1P36542 298 aaKnown RBP13.72□□□□□ -0.21
SF1-202ENST00000334944 AGTR2P50052 363 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 DNAJB13P59910 316 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 GRB7Q14451 532 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 KIF19Q2TAC6 998 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 LHX8Q68G74 356 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 GLT6D1Q7Z4J2 308 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 ITIH5Q86UX2 942 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 PIANPQ8IYJ0 282 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 PELI3Q8N2H9 469 aa13.72□□□□□ -0.21
SF1-202ENST00000334944 ZNF420Q8TAQ5 688 aaPredicted RBP13.72□□□□□ -0.21
SF1-202ENST00000334944 PPP1R2P1Q96PQ5 205 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms