RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PARGQ86W56 976 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 PLD6Q8N2A8 252 aaKnown RBP12.86□□□□□ -0.35
VSTM4-202ENST00000332853 TCAIMQ8N3R3 496 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 C8orf48Q96LL4 319 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 UNC93B1Q9H1C4 597 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 CORO1CQ9ULV4 474 aaPredicted RBP12.86□□□□□ -0.35
VSTM4-202ENST00000332853 A8MT66 165 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 KRT75O95678 551 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 PRNPP04156 253 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 C2orf80Q0P641 193 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 SIX1Q15475 284 aaPredicted RBP12.86□□□□□ -0.35
VSTM4-202ENST00000332853 CCNYL2Q5T2Q4 361 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 VANGL1Q8TAA9 524 aaPredicted RBP12.86□□□□□ -0.35
VSTM4-202ENST00000332853 RERGQ96A58 199 aaPredicted RBP12.86□□□□□ -0.35
VSTM4-202ENST00000332853 C3orf18Q9UK00 162 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 PSME2Q9UL46 239 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 GNEQ9Y223 722 aaKnown RBP12.86□□□□□ -0.35
VSTM4-202ENST00000332853 ECI2O75521 394 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 CLDN7O95471 211 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 PROZP22891 400 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 HERVK_113P63132 956 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 CREB5Q02930 508 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 RIPK1Q13546 671 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 HLA-DQA1Q5Y7H0 255 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 R3HCC1LQ7Z5L2 792 aaKnown RBP12.86□□□□□ -0.35
VSTM4-202ENST00000332853 ERVK-6Q9BXR3 956 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 PCDHAC1Q9H158 963 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 CORO2BQ9UQ03 480 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 MAP4K5Q9Y4K4 846 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 FAM25AB3EWG3 89 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 FAM25CB3EWG5 89 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 FAM25GB3EWG6 89 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 SUV39H1O43463 412 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 DLX3O60479 287 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 CCDC159P0C7I6 412 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 HAPLN1P10915 354 aaPredicted RBP12.86□□□□□ -0.35
VSTM4-202ENST00000332853 SSR2P43308 183 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 RFTN1Q14699 578 aaPredicted RBP12.86□□□□□ -0.35
VSTM4-202ENST00000332853 TTC23Q5W5X9 447 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 SULT1C3Q6IMI6 304 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 MOCOSQ96EN8 888 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 FAM192AQ9GZU8 254 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 DAPK2Q9UIK4 370 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 SAP18O00422 153 aaKnown RBP12.86□□□□□ -0.35
VSTM4-202ENST00000332853 OR10H2O60403 315 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 MYL12AP19105 171 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 KIR3DL1P43629 444 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 CARD16Q5EG05 197 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 GPR107Q5VW38 600 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 TMEM175Q9BSA9 504 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 NDEL1Q9GZM8 345 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 C11orf49Q9H6J7 331 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 KLHL1Q9NR64 748 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 MCM8Q9UJA3 840 aa12.86□□□□□ -0.35
VSTM4-202ENST00000332853 CCDC189A1A4V9 331 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 CCDC85CA6NKD9 419 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 GJB5O95377 273 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 PAICSP22234 425 aaKnown RBP12.85□□□□□ -0.35
VSTM4-202ENST00000332853 ELP6Q0PNE2 266 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 ACSBG2Q5FVE4 666 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 B3GNT6Q6ZMB0 384 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 CMTM8Q8IZV2 173 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 KBTBD7Q8WVZ9 684 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 GPR62Q9BZJ7 368 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 POMPQ9Y244 141 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 ILVBLA1L0T0 632 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 MGRN1O60291 552 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 OR10H3O60404 316 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 ANXA4P09525 319 aaPredicted RBP12.85□□□□□ -0.35
VSTM4-202ENST00000332853 GMPRP36959 345 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 NSG1P42857 185 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 CASP9P55211 416 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 MTPNP58546 118 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 CHRNA6Q15825 494 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 LDLRAD1Q5T700 205 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 CNKSR3Q6P9H4 555 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 CHST15Q7LFX5 561 aaPredicted RBP12.85□□□□□ -0.35
VSTM4-202ENST00000332853 SNX20Q7Z614 316 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 FAM129CQ86XR2 697 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 OR10A6Q8NH74 314 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 PTPN18Q99952 460 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 FAM53CQ9NYF3 392 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 KLHL3Q9UH77 587 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 IMPDH1P20839 514 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 USP46P62068 366 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 SLC18A2Q05940 514 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 RGS1Q08116 209 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 Q6ZVU0 165 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 ZNF655Q8N720 491 aaPredicted RBP12.85□□□□□ -0.35
VSTM4-202ENST00000332853 PNPLA3Q9NST1 481 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 FLRT1Q9NZU1 646 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 PRDX6P30041 224 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 GSTM5P46439 218 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 ECT2LQ008S8 904 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 INAQ16352 499 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 BROXQ5VW32 411 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 SERINC5Q86VE9 423 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 ZFP28Q8NHY6 868 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 HTATIP2Q9BUP3 242 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 R3HDMLQ9H3Y0 253 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms