RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 C6orf136Q5SQH8 315 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 Q6ZSR9 355 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 EFL1Q7Z2Z2 1120 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 ADAMTSL2Q86TH1 951 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 RBFAQ8N0V3 343 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 FIBCD1Q8N539 461 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 RIN3Q8TB24 985 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 DNAJB14Q8TBM8 379 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 METTL6Q8TCB7 284 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 PBXIP1Q96AQ6 731 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 PDLIM5Q96HC4 596 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 Q9H521 79 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 COQ10BQ9H8M1 238 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 SCN8AQ9UQD0 1980 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 A0A1W2PP18 115 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 OR7A17O14581 309 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 SYNCRIPO60506 623 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 TIPRLO75663 272 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 SLC22A3O75751 556 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 ITGB8P26012 769 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 SOX11P35716 441 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 ERVK-8P63133 956 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 NFYCQ13952 458 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 TIGD2Q4W5G0 525 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 RABL3Q5HYI8 236 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 HMBOX1Q6NT76 420 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 TMC8Q8IU68 726 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 SPPL2CQ8IUH8 684 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 OR2T34Q8NGX1 318 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 OR2T3Q8NH03 318 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 PPWD1Q96BP3 646 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 APOL5Q9BWW9 433 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 ABCG8Q9H221 673 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 ATP13A3Q9H7F0 1226 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 GID8Q9NWU2 228 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 SLAMF8Q9P0V8 285 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 CRLS1Q9UJA2 301 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 GNPTGQ9UJJ9 305 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 TMCO1Q9UM00 188 aa14.66□□□□□ -0.06
CLCNKA-201ENST00000331433 DENND4CQ5VZ89 1909 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 GLYATL1P3A0A0U1RQE8 302 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 NPIPB15A6NHN6 443 aaPredicted RBP14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 STAMBPO95630 424 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 ACRV1P26436 265 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 IL12AP29459 219 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 HSPA7P48741 367 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 GTF2H2Q13888 395 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 GTF2H2CQ6P1K8 395 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 PRMT9Q6P2P2 845 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 IL27RAQ6UWB1 636 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 HTR3DQ70Z44 454 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 CMTM8Q8IZV2 173 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 SFRP1Q8N474 314 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 OR4F6Q8NGB9 312 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 TRAPPC9Q96Q05 1148 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 TSC22D3Q99576 134 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 BRINP2Q9C0B6 783 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 RIC8BQ9NVN3 520 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 ELOVL2Q9NXB9 296 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 ABHD14A-ACY1A0A1B0GW23 586 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 LILRB3O75022 631 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 IGSF6O95976 241 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 CSF2RAP15509 400 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 RPS3P23396 243 aaKnown RBP eCLIP14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 WDR5P61964 334 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 PCBP2Q15366 365 aaKnown RBP eCLIP14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 PHKG1Q16816 387 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 FUT11Q495W5 492 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 ATP6AP1LQ52LC2 224 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 MPPE1Q53F39 396 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 IFNEQ86WN2 208 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 MYO1HQ8N1T3 1032 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 NUDT8Q8WV74 236 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 DUS3LQ96G46 650 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 CIB1Q99828 191 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 LRRC3Q9BY71 257 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 ABCB8Q9NUT2 735 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 KIAA1522Q9P206 1035 aaPredicted RBP14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 ZMYM5Q9UJ78 669 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 APPL1Q9UKG1 709 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 AURKCQ9UQB9 309 aa14.65□□□□□ -0.06
CLCNKA-201ENST00000331433 C7orf72A4D263 438 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 RAD51BO15315 384 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 SOCS5O75159 536 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 LRG1P02750 347 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 S100BP04271 92 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 HSD17B1P14061 328 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 GDF5P43026 501 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 POLR2JP52435 117 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 SLC7A9P82251 487 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 COQ5Q5HYK3 327 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 ADGRG2Q8IZP9 1017 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 FIBINQ8TAL6 211 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 VOPP1Q96AW1 172 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 YME1L1Q96TA2 773 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 SLC29A1Q99808 456 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 IPPKQ9H8X2 491 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 PCDHA9Q9Y5H5 950 aa14.64□□□□□ -0.07
CLCNKA-201ENST00000331433 ST14Q9Y5Y6 855 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms